Factsheet for GSMUA_Achr7P14970_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, plastid
BaCelLo:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, golgi, plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P13730_001	Banana	extracellular, plasma membrane	54.75	36.56
GSMUA_Achr8P00440_001	Banana	cytosol, plasma membrane, plastid	14.71	30.37
GSMUA_Achr8P08530_001	Banana	plastid	20.81	24.47
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	15.61	23.79
GSMUA_Achr8P01660_001	Banana	plastid	16.97	21.19
GSMUA_Achr11P...	Banana	plastid	16.74	20.11
GSMUA_Achr2P05940_001	Banana	cytosol, extracellular, plasma membrane	18.55	18.72
GSMUA_Achr6P35670_001	Banana	plastid	19.23	11.99
GSMUA_AchrUn_...	Banana	plastid	20.14	11.87

Protein Annotations

MapMan:35.1	GO:GO:0000302	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009648	GO:GO:0009941	GO:GO:0016020	GO:GO:0016021	GO:GO:0048366	EnsemblPlantsGene:GSMUA_Achr7G14970_001
EnsemblPlants:GSMUA_Achr7P14970_001	EnsemblPlants:GSMUA_Achr7T14970_001	UniProt:M0THN4	PFAM:PF11891	PANTHER:PTHR31038	PANTHER:PTHR31038:SF9
InterPro:RETICULATA-related	TMHMM:TMhelix	UniParc:UPI0002958C5E	SEG:seg	:	:

Description

Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G14970_001]

Coordinates

chr7:-:12011059..12026521

Molecular Weight (calculated)

47722.2 Da

IEP (calculated)

7.973

GRAVY (calculated)

-0.049

Length

442 amino acids

Sequence
(BLAST)

001: MALCCSSGEG YLGNNLVSCR SRNVDFEVKG SRFNLRPTPE RCLFSKVTVL VTAFRAGKGN LCCGKRKLNA GIRSELQPSA EVNSGHLDLS SLKECGDVSV
101: KKVSGNIESD DRVDLDHGSG STDFPNGSGG NGKFPPGGGG GDDGDNSDDY KEGEFGPLLK YEEVIKEVEA RGARLPSDML EAAKASGIQK LLLYRYLDLQ
201: ASAWPIGVAM KSCAIFRNRM LADPSFLFKV GTEIIIDSCC ATFAEVQKRG KDFWAEFELY AADLLVGVVV NVALVGMLAP YVRFGQTSTS NSLLGRVARA
301: YGALPSSVFE AERPGCKFSI QQRVATYFYK GLLYGSVGFA CGLIGQGIAN FIMTAKRTVK KTEEDIPVPP LIESAALWGV FLAVSSNTRY QIINGLERLV
401: EASSLAKQSP PITMAFTVGV RFANNIYGGM QFVDWARWSG VQ

Best Arabidopsis Sequence Match ( AT2G37860.3 )
(BLAST)

001: MAGCAMNLQF SSVVKVRNEI SSFGICNRDF VFRDLAKAMK VPVLRIRGGS GRQRSRLFVV NMSQSPIEPQ SGGFAATEQI KGEGDNSILG KDNVRNLGTD
101: QLENLDIDGN VGDGFNGSDG NGGGGGGGNG GEGDGEGEDY EEKEFGPILK FEEVMKETEA RGATLPSDML EAAKNYGIRK VLLLRYLDLQ SSAGLLGFAI
201: RSWAMLRNRM LADPSFLFKI GAEIVIDSCC ATVAEVQKRG KDFWAEFELY VADLLVGTVV NIALVGMLAP YVRFGQPSAS PGFLGRMVFA YNALPSSVFE
301: AERPGCRFSA QQRLATYFYK GIMYGAVGFG CGIVGQGIAN LIMTAKRNIN KSEENIPVPP LIKSAALWGV FLSVSSNTRY QIINGLERVV EASPFAKKFP
401: PAAMAFTVGV RLANNIYGGM QFVDWARLSG CQ

Arabidopsis Description

REProtein RETICULATA, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.