Factsheet for GSMUA_Achr8P08530_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00440_001	Banana	cytosol, plasma membrane, plastid	52.66	92.52
HORVU0Hr1G000510.2	Barley	cytosol	45.74	75.44
Bra008880.1-P	Field mustard	cytosol	55.85	74.73
Os05t0388600-01	Rice	plasma membrane	69.95	69.58
Zm00001d038085_P001	Maize	plastid	70.21	68.22
TraesCS1B01G254100.1	Wheat	unclear	68.09	67.02
TraesCS1A01G242600.1	Wheat	plastid	67.82	66.41
TraesCS1D01G242600.1	Wheat	golgi	67.55	66.15
KRH24069	Soybean	endoplasmic reticulum, mitochondrion	63.3	65.38
Os01t0957200-01	Rice	plastid	67.02	64.78
KRH29040	Soybean	endoplasmic reticulum	62.5	63.86
AT5G12470.1	Thale cress	plastid	64.89	63.21
EES18163	Sorghum	plastid	69.41	63.2
CDX97204	Canola	plastid	62.23	62.57
CDX70479	Canola	plastid	62.23	62.4
CDX78491	Canola	plastid	61.97	61.97
Bra006164.1-P	Field mustard	plastid	61.97	61.64
CDY53965	Canola	plastid	61.97	61.48
HORVU3Hr1G109880.1	Barley	plastid	60.64	58.61
PGSC0003DMT400082409	Potato	plastid	63.83	58.39
Solyc11g065490.1.1	Tomato	plastid	63.83	58.11
Zm00001d042050_P001	Maize	plastid	58.51	53.01
KXG34151	Sorghum	plastid	56.12	50.48
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	18.09	23.45
GSMUA_Achr11P...	Banana	plastid	22.61	23.1
GSMUA_Achr8P01660_001	Banana	plastid	21.28	22.6
GSMUA_Achr7P14970_001	Banana	plastid	24.47	20.81
GSMUA_Achr6P35670_001	Banana	plastid	32.45	17.21
GSMUA_AchrUn_...	Banana	plastid	32.98	16.53
GSMUA_Achr2P05940_001	Banana	cytosol, extracellular, plasma membrane	19.15	16.44
GSMUA_Achr8P13730_001	Banana	extracellular, plasma membrane	26.6	15.11

Protein Annotations

EnsemblPlants:GSMUA_Achr8P08530_001	EnsemblPlants:GSMUA_Achr8T08530_001	EnsemblPlantsGene:GSMUA_Achr8G08530_001	InterPro:RETICULATA-related	PANTHER:PTHR31620	PANTHER:PTHR31620:SF8
PFAM:PF11891	SEG:seg	UniParc:UPI0002965F60	UniProt:M0TNQ6	MapMan:35.1	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G08530_001]

Coordinates

chr8:-:5718173..5728231

Molecular Weight (calculated)

40384.9 Da

IEP (calculated)

10.059

GRAVY (calculated)

0.154

Length

376 amino acids

Sequence
(BLAST)

001: MAAAAPGAAG PTSLRVSSSL SHRLPSQALA SPLTVRFFSR SLPPRRIKIS LPSSARRPVT VRSGGGGGGE GGGGGSGDGD GEDGSSGRKN RSEALLVLAE
101: AGRTLESLPK DLAAAIEAGR IPGSIVQRFF ELEKSPVFRW LLQFGGFKER LLADDLFLAK VAIECGVGIF TKTAAEWERR RENFMKELDF VFADVVMAIV
201: ADFMLVWLPA PTVSLRPPLQ FNAGPIAKFF YNCPDNAFQV ALAGTSYSFL QRVGAIMRNG SKLFIVGTSA SLIGTGITNA LINVRKAIDK DFGVEAEDVP
301: ILSTSVAYGV YMAVSSNLRY QVLAGVIEQR ILEPLLHNQK LALSALCFAV RTGNTFLGSL LWVDYARWVG VQKIRE

Best Arabidopsis Sequence Match ( AT5G12470.1 )
(BLAST)

001: MAIASCFFCV PTPNTAISES NLTWPHIASF PRLSSSSSFN GVISAKSISF NRRVPITPVL SASSGNGGSD NNGGGLSGGG GGGDGGKNDG DGHGDEDRDR
101: NRNEAMLLLK ESGIELESLP KDLAAAIEAG RIPGSVITRF LELQKSAVMR WLMQFGGFRE RLLADDLFMA KLAMECGVGI FTKTAAEYER RRENFFNELE
201: VVFADVAMAI IADFMLVYLP APTVSLRPPL ALTAGGISKF FHNCPDNAFQ VALSGTSYTL LQRLGAITRN GAKLFAVGTT SSLVGTAITN AFIKARKAVD
301: QNSEGEVETV PIVSTSVAYG VYMAVSSNLR YQIVAGVIEQ RLLEPMLHQH KLALSALCFA VRTGNTFLGS LLWVDYARLI GIQKSH

Arabidopsis Description

RER4Protein RETICULATA-RELATED 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94CJ5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.