Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P17750_001 Banana nucleus 58.14 12.85
Os03t0798200-01 Rice nucleus 53.49 11.95
GSMUA_Achr9P10710_001 Banana nucleus 52.33 11.31
Zm00001d034468_P001 Maize nucleus 48.84 10.85
KXG37357 Sorghum nucleus 46.51 10.31
TraesCS5D01G450400.1 Wheat nucleus 47.67 10.28
TraesCS5B01G447600.1 Wheat nucleus 46.51 10.23
GSMUA_Achr5P03230_001 Banana nucleus 52.33 10.23
TraesCS5A01G443000.1 Wheat nucleus 47.67 10.17
HORVU5Hr1G106470.4 Barley nucleus 45.35 9.2
GSMUA_Achr8P18370_001 Banana mitochondrion, nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:GSMUA_Achr8P18360_001EnsemblPlants:GSMUA_Achr8T18360_001EnsemblPlantsGene:GSMUA_Achr8G18360_001Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDInterPro:Znf_RING_CSPANTHER:PTHR10825PANTHER:PTHR10825:SF47PFAM:PF13923
PFscan:PS50089ScanProsite:PS00518SEG:segSMART:SM00184SUPFAM:SSF57850UniParc:UPI0002959E66
UniProt:M0TRI9MapMan:12.3.5.1.1.1::::
Description
Putative uncharacterized protein Sb08g020500 [Source:GMGC_GENE;Acc:GSMUA_Achr8G18360_001]
Coordinates
chr8:+:22416432..22418080
Molecular Weight (calculated)
9455.7 Da
IEP (calculated)
7.146
GRAVY (calculated)
0.051
Length
86 amino acids
Sequence
(BLAST)
1: MLSAGAGEGE ASAAGPSQVV MVRRDLLAKC MTCPLCLKLL RDATTIIECL HTFCRKCIYE KLNDEETNHC PSCNIYLGPL PLDKLR
Best Arabidopsis Sequence Match ( AT2G30580.3 )
(BLAST)
001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIR
Arabidopsis Description
DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.