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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG37357 Sorghum nucleus 87.6 87.37
Os03t0798200-01 Rice nucleus 58.91 59.22
TraesCS5D01G450400.1 Wheat nucleus 58.14 56.39
TraesCS5A01G443000.1 Wheat nucleus 57.11 54.84
TraesCS5B01G447600.1 Wheat nucleus 55.3 54.73
HORVU5Hr1G106470.4 Barley nucleus 56.33 51.42
GSMUA_Achr8P18360_001 Banana cytosol 10.85 48.84
Zm00001d033322_P001 Maize nucleus 40.05 29.47
Zm00001d041405_P001 Maize nucleus 36.69 29.22
Zm00001d030985_P001 Maize nucleus 33.85 27.52
GSMUA_Achr8P18370_001 Banana mitochondrion, nucleus 21.71 25.3
Zm00001d033967_P001 Maize nucleus 23.51 23.82
Zm00001d013303_P001 Maize nucleus 23.77 23.65
Zm00001d018972_P005 Maize nucleus, plastid 19.12 14.6
Zm00001d031900_P001 Maize cytosol 10.59 13.99
Protein Annotations
MapMan:12.3.5.1.1.1Gene3D:3.30.40.10UniProt:A0A1D6L7W8GO:GO:0003674GO:GO:0005488GO:GO:0046872
InterPro:IPR001841InterPro:IPR013083ProteinID:ONM10344.1PFAM:PF00097ScanProsite:PS00518PFscan:PS50089
PANTHER:PTHR10825PANTHER:PTHR10825:SF70SMART:SM00184SUPFAM:SSF57850UniParc:UPI000220EBBBEnsemblPlantsGene:Zm00001d034468
EnsemblPlants:Zm00001d034468_P001EnsemblPlants:Zm00001d034468_T001InterPro:Znf_C3HC4_RING-typeInterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDInterPro:Znf_RING_CS
SEG:seg:::::
Description
Protein binding protein
Coordinates
chr1:+:293832927..293851213
Molecular Weight (calculated)
42564.1 Da
IEP (calculated)
10.787
GRAVY (calculated)
-0.430
Length
387 amino acids
Sequence
(BLAST)
001: MESAVLACEA PTAAAAAAPG AGGDRGAEGV VMLRRSGLAA CLTCPLCGRL LRDAATITEC LHTFCRKCIS EEFVNKEVCC CPVCSIDLGC APLEKLRIDH
101: SLQYVRSKVF PSKKRKVEDP EVTSPITSPI KTKVRSLSSL TKHAPQMSMQ KCLRKRRTKA SCLQNLPLHS TLRGSSNITK KSGGWRPLGC HFRAAKKKRS
201: LRPKSDDIKT AGKRTDDPVD VTLASQAKTR KQITRRGNLE KRTGTKKVLI LKGKQKNTKT KNTPNKRRLP ALWFYLLAAF DQKGHPPLPQ IPSKFLRIKD
301: VNLPASFIQK YLAQKLNLSS ETEVEIFCGG RPVSPGITLH DLADHWIGKR SKGRVRSSVG TPAAEFVLKV FYARSGAPLP KTESNQD
Best Arabidopsis Sequence Match ( AT2G30580.2 )
(BLAST)
001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
Arabidopsis Description
DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.