Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG37357 | Sorghum | nucleus | 87.6 | 87.37 |
Os03t0798200-01 | Rice | nucleus | 58.91 | 59.22 |
TraesCS5D01G450400.1 | Wheat | nucleus | 58.14 | 56.39 |
TraesCS5A01G443000.1 | Wheat | nucleus | 57.11 | 54.84 |
TraesCS5B01G447600.1 | Wheat | nucleus | 55.3 | 54.73 |
HORVU5Hr1G106470.4 | Barley | nucleus | 56.33 | 51.42 |
GSMUA_Achr8P18360_001 | Banana | cytosol | 10.85 | 48.84 |
Zm00001d033322_P001 | Maize | nucleus | 40.05 | 29.47 |
Zm00001d041405_P001 | Maize | nucleus | 36.69 | 29.22 |
Zm00001d030985_P001 | Maize | nucleus | 33.85 | 27.52 |
GSMUA_Achr8P18370_001 | Banana | mitochondrion, nucleus | 21.71 | 25.3 |
Zm00001d033967_P001 | Maize | nucleus | 23.51 | 23.82 |
Zm00001d013303_P001 | Maize | nucleus | 23.77 | 23.65 |
Zm00001d018972_P005 | Maize | nucleus, plastid | 19.12 | 14.6 |
Zm00001d031900_P001 | Maize | cytosol | 10.59 | 13.99 |
Protein Annotations
MapMan:12.3.5.1.1.1 | Gene3D:3.30.40.10 | UniProt:A0A1D6L7W8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
InterPro:IPR001841 | InterPro:IPR013083 | ProteinID:ONM10344.1 | PFAM:PF00097 | ScanProsite:PS00518 | PFscan:PS50089 |
PANTHER:PTHR10825 | PANTHER:PTHR10825:SF70 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000220EBBB | EnsemblPlantsGene:Zm00001d034468 |
EnsemblPlants:Zm00001d034468_P001 | EnsemblPlants:Zm00001d034468_T001 | InterPro:Znf_C3HC4_RING-type | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS |
SEG:seg | : | : | : | : | : |
Description
Protein binding protein
Coordinates
chr1:+:293832927..293851213
Molecular Weight (calculated)
42564.1 Da
IEP (calculated)
10.787
GRAVY (calculated)
-0.430
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MESAVLACEA PTAAAAAAPG AGGDRGAEGV VMLRRSGLAA CLTCPLCGRL LRDAATITEC LHTFCRKCIS EEFVNKEVCC CPVCSIDLGC APLEKLRIDH
101: SLQYVRSKVF PSKKRKVEDP EVTSPITSPI KTKVRSLSSL TKHAPQMSMQ KCLRKRRTKA SCLQNLPLHS TLRGSSNITK KSGGWRPLGC HFRAAKKKRS
201: LRPKSDDIKT AGKRTDDPVD VTLASQAKTR KQITRRGNLE KRTGTKKVLI LKGKQKNTKT KNTPNKRRLP ALWFYLLAAF DQKGHPPLPQ IPSKFLRIKD
301: VNLPASFIQK YLAQKLNLSS ETEVEIFCGG RPVSPGITLH DLADHWIGKR SKGRVRSSVG TPAAEFVLKV FYARSGAPLP KTESNQD
101: SLQYVRSKVF PSKKRKVEDP EVTSPITSPI KTKVRSLSSL TKHAPQMSMQ KCLRKRRTKA SCLQNLPLHS TLRGSSNITK KSGGWRPLGC HFRAAKKKRS
201: LRPKSDDIKT AGKRTDDPVD VTLASQAKTR KQITRRGNLE KRTGTKKVLI LKGKQKNTKT KNTPNKRRLP ALWFYLLAAF DQKGHPPLPQ IPSKFLRIKD
301: VNLPASFIQK YLAQKLNLSS ETEVEIFCGG RPVSPGITLH DLADHWIGKR SKGRVRSSVG TPAAEFVLKV FYARSGAPLP KTESNQD
001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
Arabidopsis Description
DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.