Factsheet for Os03t0798200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G450400.1	Wheat	nucleus	63.12	60.9
KXG37357	Sorghum	nucleus	61.04	60.57
TraesCS5B01G447600.1	Wheat	nucleus	60.52	59.59
Zm00001d034468_P001	Maize	nucleus	59.22	58.91
TraesCS5A01G443000.1	Wheat	nucleus	60.26	57.57
HORVU5Hr1G106470.4	Barley	nucleus	59.74	54.25
GSMUA_Achr8P18360_001	Banana	cytosol	11.95	53.49
Os03t0741700-00	Rice	cytosol	19.74	39.58
Os12t0600200-03	Rice	cytosol, nucleus	27.27	30.52
Os03t0632800-01	Rice	nucleus	31.43	28.01
GSMUA_Achr8P18370_001	Banana	mitochondrion, nucleus	20.52	23.8

Protein Annotations

MapMan:12.3.5.1.1.1	Gene3D:3.30.40.10	EntrezGene:4334434	ProteinID:ABF99361.1	ProteinID:BAF13482.1	ProteinID:BAS86862.1
ProteinID:EEE60101.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR001841	InterPro:IPR013083
EnsemblPlantsGene:Os03g0798200	EnsemblPlants:Os03t0798200-01	PFAM:PF00097	ScanProsite:PS00518	PFscan:PS50089	PANTHER:PTHR10825
PANTHER:PTHR10825:SF70	UniProt:Q10C16	SUPFAM:SSF57850	UniParc:UPI0000DB4B2F	RefSeq:XP_015628300.1	InterPro:Znf_C3HC4_RING-type
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:	:

Description

RING finger proteinZinc finger, RING/FYVE/PHD-type domain containing protein. (Os03t0798200-01)

Coordinates

chr3:+:33267192..33272140

Molecular Weight (calculated)

42673.1 Da

IEP (calculated)

10.564

GRAVY (calculated)

-0.512

Length

385 amino acids

Sequence
(BLAST)

001: MQGATPGDAA GEEVGGGGDV VMVRRASVAA CLTCPLCGRL LRDATTISEC LHTFCRKCIH EEFVDKESCC CPTCNIDLGC APLEKLRVDH SMQFVRSRIF
101: PFKRRKVENP EIICPVASPV KRKERSLSSL TIPAPQVSIQ KCLTKRRTKA SCLRNFPLHS TSRGSKDTSK KLGGWRPLGC QLKLGKDKKS LKSSVKDTNR
201: TKSKSGDTDD GAPASKAKAR EPFTRYGRAA KRTGRKKLLM LKNKKKRFKA KQPSKKRRFR ALWFYLLAAF DQRGVPTLPQ LPAKYLRIKD VDLPASIIQK
301: YLAQKLNLSS ETEVEVLCGG KVVNQGMTLH DLADCWLEKG PKSRMRSSVG SPATGFMVTL FYRRPDVDVS SSPAPPQPDT ESCHS

Best Arabidopsis Sequence Match ( AT2G30580.2 )
(BLAST)

001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN

Arabidopsis Description

DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.