Factsheet for GSMUA_Achr8P24990_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0137500-01	Rice	cytosol	75.25	71.29
Os11t0141000-02	Rice	cytosol	74.49	70.57
EES07947	Sorghum	cytosol	73.23	69.54
Zm00001d052462_P001	Maize	cytosol, mitochondrion, nucleus	72.98	68.32
TraesCS5B01G134400.1	Wheat	nucleus	71.21	68.12
HORVU5Hr1G043520.1	Barley	nucleus	70.96	67.87
TraesCS5D01G142100.1	Wheat	nucleus	70.96	67.87
TraesCS5A01G135500.1	Wheat	nucleus	70.71	67.63
Zm00001d004976_P002	Maize	cytosol, mitochondrion, nucleus	72.47	67.06
GSMUA_Achr4P09110_001	Banana	cytosol, golgi	20.96	58.87
OQU87588	Sorghum	cytosol	18.69	57.36
OQU89556	Sorghum	mitochondrion	18.18	52.17
KXG25489	Sorghum	cytosol, mitochondrion	27.78	47.21
GSMUA_Achr4P09120_001	Banana	endoplasmic reticulum, plasma membrane	23.48	36.05

Protein Annotations

Gene3D:1.25.40.540	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006808	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0009409	GO:GO:0009628
GO:GO:0009719	GO:GO:0009737	GO:GO:0009791	GO:GO:0009966	GO:GO:0009987	GO:GO:0010187
GO:GO:0016043	GO:GO:0016049	GO:GO:0019900	GO:GO:0019903	GO:GO:0030307	GO:GO:0031929
GO:GO:0032008	GO:GO:0040007	EnsemblPlantsGene:GSMUA_Achr8G24990_001	EnsemblPlants:GSMUA_Achr8P24990_001	EnsemblPlants:GSMUA_Achr8T24990_001	InterPro:IPR038511
UniProt:M0TTF2	PFAM:PF04177	PANTHER:PTHR10933	PANTHER:PTHR10933:SF9	InterPro:TAP42/TAP46-like_sf	InterPro:TAP46-like
UniParc:UPI0002964C2A	SEG:seg	:	:	:	:

Description

PP2A regulatory subunit TAP46 [Source:GMGC_GENE;Acc:GSMUA_Achr8G24990_001]

Coordinates

chr8:-:28966708..28977140

Molecular Weight (calculated)

45114.4 Da

IEP (calculated)

5.177

GRAVY (calculated)

-0.768

Length

396 amino acids

Sequence
(BLAST)

001: MGEWKTEDMP LPALFEEASK IHAMASESSV DREALRKGIQ TLRRCDEMIS KLGLFSSNET KDDVSTANLK YLLVPFYIGE LTEKVAEDGR LKVLKISRDH
101: LKEFISICET LELIPEEELE RSSQRGANTP ANQRAKKIAR FKRQRAAEAK LQEIKEKKER RWRSLRAAAL SSPVEVGEED VLDDDGEEER EAWLTTISLS
201: ICKAFDLLEM LKKEEEMLAA VKERQSKEGE DFAHEILDER TKRAETWHRN AASKAAVSKP AEPITCATFA QDVIEGRAQL SQAHEHKHQP MIFGPASLVG
301: GRLTSERERM AAQVFQPGYR LPTMSIEEAG LREMEMMKKW QEWNVKLMEE ANSSWHKEGT TSTEDEDAEV EKARAWDDWK DDHPRGAGNK KLTPCG

Best Arabidopsis Sequence Match ( AT5G53000.1 )
(BLAST)

001: MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK
101: LKEFFSFCEA MELVPDEELE ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD IPDDDSEEER EAWLSSINLA
201: ICKAIDLLEM LKREEEMLSA IKERQLKDGE GGFSRDALDD RTKKAETWHR DAAARIQYSK PAQPITCATF AQDVLEGRAS VSQGHEHKNQ PLIFGPASIV
301: GGPLSTERER MIAQVFQPSH RMPTMCIEDA GLTEMNIMND WQEQTKKAIE EATTSWYNDK PLRRKEEDEE DDDEDEEAVM KARAFDDWKD DNPRGAGNKK
401: LTPCG

Arabidopsis Description

TAP46PP2A regulatory subunit TAP46 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.