Factsheet for Zm00001d004976_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07947	Sorghum	cytosol	91.82	94.24
Zm00001d052462_P001	Maize	cytosol, mitochondrion, nucleus	89.25	90.31
Os12t0137500-01	Rice	cytosol	85.98	88.04
Os11t0141000-02	Rice	cytosol	85.05	87.08
TraesCS5A01G135500.1	Wheat	nucleus	80.14	82.85
TraesCS5B01G134400.1	Wheat	nucleus	79.91	82.61
TraesCS5D01G142100.1	Wheat	nucleus	79.67	82.37
HORVU5Hr1G043520.1	Barley	nucleus	78.74	81.4
GSMUA_Achr8P24990_001	Banana	cytosol	67.06	72.47
PGSC0003DMT400010943	Potato	nucleus	45.79	67.59
KRH64428	Soybean	cytosol, mitochondrion, nucleus	61.68	66.33
VIT_16s0098g01760.t01	Wine grape	cytosol, mitochondrion, nucleus	61.68	65.51
Solyc01g006110.2.1	Tomato	cytosol	61.22	64.69
PGSC0003DMT400081985	Potato	cytosol, mitochondrion, nucleus	60.98	64.44
CDY19650	Canola	cytosol	60.51	63.95
Bra003091.1-P	Field mustard	nucleus	60.51	63.95
CDY50498	Canola	cytosol	58.64	63.54
KRH53508	Soybean	endoplasmic reticulum, golgi, plastid	61.68	62.41
AT5G53000.1	Thale cress	cytosol	58.41	61.73
KRH05100	Soybean	cytosol, endoplasmic reticulum, nucleus	9.11	58.21
CDX96173	Canola	cytosol	33.41	57.66
KRH75240	Soybean	cytosol	9.81	51.85
GSMUA_Achr4P09110_001	Banana	cytosol, golgi	15.65	47.52

Protein Annotations

EnsemblPlants:Zm00001d004976_P002	EnsemblPlants:Zm00001d004976_T002	EnsemblPlantsGene:Zm00001d004976	Gene3D:1.25.40.540	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009966	GO:GO:0009987	InterPro:IPR038511	InterPro:TAP42/TAP46-like_sf	InterPro:TAP46-like
ncoils:Coil	PANTHER:PTHR10933	PANTHER:PTHR10933:SF9	PFAM:PF04177	ProteinID:ONM19872.1	SEG:seg
UniParc:UPI000844B249	UniProt:A0A1D6EID3	MapMan:35.1	:	:	:

Description

PP2A regulatory subunit TAP46

Coordinates

chr2:-:151616446..151621321

Molecular Weight (calculated)

48519.4 Da

IEP (calculated)

4.979

GRAVY (calculated)

-0.739

Length

428 amino acids

Sequence
(BLAST)

001: MVDVEETGNK LQSQMRLHAE PEDDAADLPL PALFDRASRL HALASSSALD QDGIRTGVDL LRRCDDMVSK LGLFSPNETK EDVSTANLKY LLVPYYLAEM
101: TEKIAQEDRI PVLKTSQDHL KEFIALCEVL ELIPEDELEL SRQKQPDTMT NRRAQKVARF KRQKAAETKL QEIRERKERR GRSLRAAALS APIEAGEEDD
201: LENDGEEERE AWLATISLAL CKAFDLLDML KKEEEMLQAV KERKAKKKIL LQTFLFCQDG NAFAREMLDE RTKKAETWHH NAANRVAYSK PADPITCATF
301: AQDVIEGRAS VSQAHEHKHQ PLIFGPASIV GGGLTSERER MTAQVFQPSY RMPTMSIEEA GLREMKMMEK WQERTAELMK ESTSAWHKDG SSSAQEDEDA
401: EEEKARAWDD WKDDNPRGAG NKKLTPCG

Best Arabidopsis Sequence Match ( AT5G53000.1 )
(BLAST)

001: MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK
101: LKEFFSFCEA MELVPDEELE ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD IPDDDSEEER EAWLSSINLA
201: ICKAIDLLEM LKREEEMLSA IKERQLKDGE GGFSRDALDD RTKKAETWHR DAAARIQYSK PAQPITCATF AQDVLEGRAS VSQGHEHKNQ PLIFGPASIV
301: GGPLSTERER MIAQVFQPSH RMPTMCIEDA GLTEMNIMND WQEQTKKAIE EATTSWYNDK PLRRKEEDEE DDDEDEEAVM KARAFDDWKD DNPRGAGNKK
401: LTPCG

Arabidopsis Description

TAP46PP2A regulatory subunit TAP46 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.