Factsheet for Os12t0137500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0141000-02	Rice	cytosol	98.09	98.09
EES07947	Sorghum	cytosol	89.23	89.45
TraesCS5A01G135500.1	Wheat	nucleus	86.6	87.44
TraesCS5B01G134400.1	Wheat	nucleus	86.36	87.2
TraesCS5D01G142100.1	Wheat	nucleus	85.89	86.72
Zm00001d004976_P002	Maize	cytosol, mitochondrion, nucleus	88.04	85.98
Zm00001d052462_P001	Maize	cytosol, mitochondrion, nucleus	86.84	85.82
HORVU5Hr1G043520.1	Barley	nucleus	84.93	85.75
GSMUA_Achr8P24990_001	Banana	cytosol	71.29	75.25
PGSC0003DMT400010943	Potato	nucleus	48.09	69.31
VIT_16s0098g01760.t01	Wine grape	cytosol, mitochondrion, nucleus	65.55	67.99
Solyc01g006110.2.1	Tomato	cytosol	64.59	66.67
OQU87588	Sorghum	cytosol	20.57	66.67
KRH64428	Soybean	cytosol, mitochondrion, nucleus	63.4	66.58
PGSC0003DMT400081985	Potato	cytosol, mitochondrion, nucleus	64.35	66.42
CDY19650	Canola	cytosol	61.96	63.95
Bra003091.1-P	Field mustard	nucleus	61.72	63.7
CDY50498	Canola	cytosol	59.81	63.29
KRH53508	Soybean	endoplasmic reticulum, golgi, plastid	63.4	62.65
AT5G53000.1	Thale cress	cytosol	59.81	61.73
OQU89556	Sorghum	mitochondrion	20.33	61.59
KRH05100	Soybean	cytosol, endoplasmic reticulum, nucleus	9.81	61.19
CDX96173	Canola	cytosol	34.45	58.06
KXG25489	Sorghum	cytosol, mitochondrion	31.34	56.22
KRH75240	Soybean	cytosol	9.81	50.62
GSMUA_Achr4P09110_001	Banana	cytosol, golgi	16.75	49.65

Protein Annotations

Gene3D:1.25.40.540	MapMan:35.1	EntrezGene:4351453	ProteinID:ABA95766.1	EMBL:AK242643	EMBL:AY224436
ProteinID:BAF29128.1	ProteinID:BAT15809.1	ProteinID:EAZ19586.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009966	GO:GO:0009987
GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0035303	GO:GO:0043666	GO:GO:0051721
InterPro:IPR038511	EnsemblPlantsGene:Os12g0137500	EnsemblPlants:Os12t0137500-01	PFAM:PF04177	PANTHER:PTHR10933	PANTHER:PTHR10933:SF9
UniProt:Q2QY04	InterPro:TAP42/TAP46-like_sf	InterPro:TAP46-like	UniParc:UPI0000681AA8	RefSeq:XP_015620759.1	SEG:seg

Description

TAP46Similar to Avr9/Cf-9 rapidly elicited protein 271 (Fragment). (Os12t0137500-01)

Coordinates

chr12:+:1817618..1821687

Molecular Weight (calculated)

47222.7 Da

IEP (calculated)

5.037

GRAVY (calculated)

-0.749

Length

418 amino acids

Sequence
(BLAST)

001: MVEVEEVSNK MQAQMRLHPA AAAEEEDADL PLPALFDKAS HLHSLASSSS LDQEGIRKGV DLLRRCDEMV SKLGLFSSNE TKDDVSTANL KYLLVPYYLG
101: EMTERVAQED RIPVLKASQD HLKEFISICE ALELISEDEL ELSRQKQPDT MANRRAQKVA RFKRQKAAET KLLEIKERKE RRRRSLRAAA LSAPIEAGEE
201: DAFEDDGEEE REAWLATISL ALCKAFDLLD MLKKEEEMLL AVKERQAKDG NAFAREMLDE RTKKAEAWHH NAANRAPYSK PADPITCATF AQDVIEGRAS
301: VSQAHEHKHQ PLIFGPASLV GGGLTSERER MAAQVFQPSY RLPTMSIEEA GLREMKMMEK WQERTAKMIQ ESNSAWHKDG SRSAQEDEDA EEEKARAWDD
401: WKDDNPRGAG NKKLTPCG

Best Arabidopsis Sequence Match ( AT5G53000.1 )
(BLAST)

001: MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK
101: LKEFFSFCEA MELVPDEELE ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD IPDDDSEEER EAWLSSINLA
201: ICKAIDLLEM LKREEEMLSA IKERQLKDGE GGFSRDALDD RTKKAETWHR DAAARIQYSK PAQPITCATF AQDVLEGRAS VSQGHEHKNQ PLIFGPASIV
301: GGPLSTERER MIAQVFQPSH RMPTMCIEDA GLTEMNIMND WQEQTKKAIE EATTSWYNDK PLRRKEEDEE DDDEDEEAVM KARAFDDWKD DNPRGAGNKK
401: LTPCG

Arabidopsis Description

TAP46PP2A regulatory subunit TAP46 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.