CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50498	Canola	cytosol	83.47	52.41
PGSC0003DMT400010943	Potato	nucleus	60.08	51.38
CDY19650	Canola	cytosol	82.26	50.37
AT5G53000.1	Thale cress	cytosol	81.45	49.88
KRH05100	Soybean	cytosol, endoplasmic reticulum, nucleus	10.89	40.3
VIT_16s0098g01760.t01	Wine grape	cytosol, mitochondrion, nucleus	62.5	38.46
KRH64428	Soybean	cytosol, mitochondrion, nucleus	61.69	38.44
Solyc01g006110.2.1	Tomato	cytosol	62.1	38.02
PGSC0003DMT400081985	Potato	cytosol, mitochondrion, nucleus	61.29	37.53
KRH53508	Soybean	endoplasmic reticulum, golgi, plastid	61.29	35.93
EES07947	Sorghum	cytosol	58.06	34.53
Os12t0137500-01	Rice	cytosol	58.06	34.45
TraesCS5D01G142100.1	Wheat	nucleus	57.26	34.3
TraesCS5A01G135500.1	Wheat	nucleus	57.26	34.3
OQU87588	Sorghum	cytosol	17.74	34.11
TraesCS5B01G134400.1	Wheat	nucleus	56.85	34.06
Os11t0141000-02	Rice	cytosol	56.85	33.73
HORVU5Hr1G043520.1	Barley	nucleus	56.05	33.57
Zm00001d004976_P002	Maize	cytosol, mitochondrion, nucleus	57.66	33.41
Zm00001d052462_P001	Maize	cytosol, mitochondrion, nucleus	56.85	33.33
OQU89556	Sorghum	mitochondrion	16.53	29.71
KXG25489	Sorghum	cytosol, mitochondrion	19.76	21.03
GSMUA_Achr4P09120_001	Banana	endoplasmic reticulum, plasma membrane	18.55	17.83
KRH75240	Soybean	cytosol	0.4	1.23

Protein Annotations

EnsemblPlants:CDX96173	EnsemblPlantsGene:GSBRNA2T00102242001	GO:A0A078E9W4	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009966	GO:GO:0009987	InterPro:TAP46-like	PANTHER:PTHR10933	PANTHER:PTHR10933:SF9	PFAM:PF04177
ProteinID:CDX96173	ProteinID:CDX96173.1	SEG:seg	UniParc:UPI0004EE2FF6	MapMan:35.1	:

Description

BnaC02g14780D

Coordinates

chrLK031893:-:263182..264450

Molecular Weight (calculated)

28145.7 Da

IEP (calculated)

4.482

GRAVY (calculated)

-0.902

Length

248 amino acids

Sequence
(BLAST)

001: MHCIHDPCVA MFKAAESRLL EIKERKERLG RSTKAATLST PVGSGEEEEE DITDDDSEEE RDAIDLMEML NRVSAIKEQQ LKNGEDEFSR DALDDRIKKA
101: ETWHRDAAAR VLYSRPAQPI TFASVSQGHE HKHQPMIFGP ASIVNGGLSS EIERMIAQVF QPSHRMPTMS IEDAGLTEMN IVNDWQEQTK KAIEEAITSW
201: YNDKPLRRKE EDENDDEDEE AVMEARAFDD WKDGNPRGAG NKKLTPCS

Best Arabidopsis Sequence Match ( AT5G53000.1 )
(BLAST)

001: MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK
101: LKEFFSFCEA MELVPDEELE ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD IPDDDSEEER EAWLSSINLA
201: ICKAIDLLEM LKREEEMLSA IKERQLKDGE GGFSRDALDD RTKKAETWHR DAAARIQYSK PAQPITCATF AQDVLEGRAS VSQGHEHKNQ PLIFGPASIV
301: GGPLSTERER MIAQVFQPSH RMPTMCIEDA GLTEMNIMND WQEQTKKAIE EATTSWYNDK PLRRKEEDEE DDDEDEEAVM KARAFDDWKD DNPRGAGNKK
401: LTPCG

Arabidopsis Description

TAP46PP2A regulatory subunit TAP46 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.