Factsheet for TraesCS5D01G142100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G134400.1	Wheat	nucleus	99.03	99.03
TraesCS5A01G135500.1	Wheat	nucleus	98.79	98.79
HORVU5Hr1G043520.1	Barley	nucleus	95.65	95.65
Os12t0137500-01	Rice	cytosol	86.72	85.89
Os11t0141000-02	Rice	cytosol	85.51	84.69
EES07947	Sorghum	cytosol	83.57	82.97
Zm00001d052462_P001	Maize	cytosol, mitochondrion, nucleus	82.37	80.61
Zm00001d004976_P002	Maize	cytosol, mitochondrion, nucleus	82.37	79.67
GSMUA_Achr8P24990_001	Banana	cytosol	67.87	70.96
OQU87588	Sorghum	cytosol	21.01	67.44
PGSC0003DMT400010943	Potato	nucleus	47.1	67.24
KRH64428	Soybean	cytosol, mitochondrion, nucleus	63.04	65.58
VIT_16s0098g01760.t01	Wine grape	cytosol, mitochondrion, nucleus	63.04	64.76
Solyc01g006110.2.1	Tomato	cytosol	63.04	64.44
PGSC0003DMT400081985	Potato	cytosol, mitochondrion, nucleus	62.8	64.2
Bra003091.1-P	Field mustard	nucleus	61.84	63.21
CDY19650	Canola	cytosol	61.84	63.21
CDY50498	Canola	cytosol	59.9	62.78
OQU89556	Sorghum	mitochondrion	20.77	62.32
KRH53508	Soybean	endoplasmic reticulum, golgi, plastid	63.53	62.17
AT5G53000.1	Thale cress	cytosol	60.14	61.48
CDX96173	Canola	cytosol	34.3	57.26
KRH05100	Soybean	cytosol, endoplasmic reticulum, nucleus	9.18	56.72
KXG25489	Sorghum	cytosol, mitochondrion	30.68	54.51
KRH75240	Soybean	cytosol	10.63	54.32
GSMUA_Achr4P09110_001	Banana	cytosol, golgi	16.43	48.23

Protein Annotations

EnsemblPlants:TraesCS5D01G142100.1	EnsemblPlantsGene:TraesCS5D01G142100	Gene3D:1.25.40.540	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009966	GO:GO:0009987	InterPro:IPR038511	InterPro:TAP42/TAP46-like_sf	InterPro:TAP46-like	PANTHER:PTHR10933
PANTHER:PTHR10933:SF9	PFAM:PF04177	SEG:seg	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5D:-:228059601..228064610

Molecular Weight (calculated)

46626.8 Da

IEP (calculated)

4.741

GRAVY (calculated)

-0.744

Length

414 amino acids

Sequence
(BLAST)

001: MGEMEDVSNR METQLRVHAA EDDADLPLPA LFDRASHLHS LASSSSIDQE GIRKGVDLLR RCDDMVSKLG LFSSNETKED VSTANLKYLL VPYYLGEMTE
101: QVEQEDRIPV LKASQDHLKE FISVCEALEL IPEDELQLYR QGQSETGANR RAQKVARFKR QKAAETKLQE IKERKERRGR SLRATALSAP IEAGEEDDLE
201: ADGEEEREAW LATISLALCK AFDLVDMLKK EEEMLLAVKE RKEKDGNAFA REMLDERRQK AEAWHQNAAS RAPYSKPAAP ITCATFAQDV IEGRASVSQA
301: HDHKHQPLIF GPASLVGGGL TSERERMAAQ VFQPSFRMPT MSIEQAGLAE MKMMEQWQER TAKMIQEASS SWHKDDTSLA QDDEDAEEEK ARAFDDWKDE
401: NPRGAGNKKL TPCG

Best Arabidopsis Sequence Match ( AT5G53000.1 )
(BLAST)

001: MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK
101: LKEFFSFCEA MELVPDEELE ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD IPDDDSEEER EAWLSSINLA
201: ICKAIDLLEM LKREEEMLSA IKERQLKDGE GGFSRDALDD RTKKAETWHR DAAARIQYSK PAQPITCATF AQDVLEGRAS VSQGHEHKNQ PLIFGPASIV
301: GGPLSTERER MIAQVFQPSH RMPTMCIEDA GLTEMNIMND WQEQTKKAIE EATTSWYNDK PLRRKEEDEE DDDEDEEAVM KARAFDDWKD DNPRGAGNKK
401: LTPCG

Arabidopsis Description

TAP46PP2A regulatory subunit TAP46 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.