CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87588	Sorghum	cytosol	86.23	92.25
KXG25489	Sorghum	cytosol, mitochondrion	76.81	45.49
KRH05100	Soybean	cytosol, endoplasmic reticulum, nucleus	13.77	28.36
EES07947	Sorghum	cytosol	65.22	21.58
PGSC0003DMT400010943	Potato	nucleus	44.2	21.03
TraesCS5D01G142100.1	Wheat	nucleus	62.32	20.77
TraesCS5B01G134400.1	Wheat	nucleus	62.32	20.77
TraesCS5A01G135500.1	Wheat	nucleus	62.32	20.77
Os12t0137500-01	Rice	cytosol	61.59	20.33
Os11t0141000-02	Rice	cytosol	61.59	20.33
HORVU5Hr1G043520.1	Barley	nucleus	60.14	20.05
GSMUA_Achr8P24990_001	Banana	cytosol	52.17	18.18
KRH64428	Soybean	cytosol, mitochondrion, nucleus	50.72	17.59
VIT_16s0098g01760.t01	Wine grape	cytosol, mitochondrion, nucleus	48.55	16.63
KRH53508	Soybean	endoplasmic reticulum, golgi, plastid	50.72	16.55
Solyc01g006110.2.1	Tomato	cytosol	48.55	16.54
CDX96173	Canola	cytosol	29.71	16.53
CDY50498	Canola	cytosol	47.1	16.46
Bra003091.1-P	Field mustard	nucleus	47.83	16.3
CDY19650	Canola	cytosol	47.83	16.3
PGSC0003DMT400081985	Potato	cytosol, mitochondrion, nucleus	47.1	16.05
AT5G53000.1	Thale cress	cytosol	47.1	16.05
GSMUA_Achr4P09110_001	Banana	cytosol, golgi	12.32	12.06
KRH75240	Soybean	cytosol	1.45	2.47

Protein Annotations

EnsemblPlants:OQU89556	EnsemblPlantsGene:SORBI_3002G213050	Gene3D:1.25.40.540	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009966	GO:GO:0009987	InterPro:IPR038511	InterPro:TAP42/TAP46-like_sf	InterPro:TAP46-like	PFAM:PF04177
ProteinID:OQU89556	ProteinID:OQU89556.1	SEG:seg	UniParc:UPI0009DC8677	UniProt:A0A1W0W5D5	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:+:60524301..60527124

Molecular Weight (calculated)

15360.4 Da

IEP (calculated)

5.094

GRAVY (calculated)

-0.284

Length

138 amino acids

Sequence
(BLAST)

001: MGVAGGSRLR RSAAGHIWKA AETKLQEIRE RKERCGRSLR AAALSAPIEA GEEDDLEDDG EEEREAWLAT ISLALCKAFD LLDMLKKEEE MLLAVKERKA
101: KVWYDHLAVV LPLRDATLET SSGVNILFVL TSSARTYT

Best Arabidopsis Sequence Match ( AT5G53000.1 )
(BLAST)

001: MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK
101: LKEFFSFCEA MELVPDEELE ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD IPDDDSEEER EAWLSSINLA
201: ICKAIDLLEM LKREEEMLSA IKERQLKDGE GGFSRDALDD RTKKAETWHR DAAARIQYSK PAQPITCATF AQDVLEGRAS VSQGHEHKNQ PLIFGPASIV
301: GGPLSTERER MIAQVFQPSH RMPTMCIEDA GLTEMNIMND WQEQTKKAIE EATTSWYNDK PLRRKEEDEE DDDEDEEAVM KARAFDDWKD DNPRGAGNKK
401: LTPCG

Arabidopsis Description

TAP46PP2A regulatory subunit TAP46 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.