CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052462_P001	Maize	cytosol, mitochondrion, nucleus	93.77	92.44
Zm00001d004976_P002	Maize	cytosol, mitochondrion, nucleus	94.24	91.82
Os12t0137500-01	Rice	cytosol	89.45	89.23
Os11t0141000-02	Rice	cytosol	88.25	88.04
TraesCS5B01G134400.1	Wheat	nucleus	83.21	83.82
TraesCS5A01G135500.1	Wheat	nucleus	83.21	83.82
TraesCS5D01G142100.1	Wheat	nucleus	82.97	83.57
HORVU5Hr1G043520.1	Barley	nucleus	82.25	82.85
GSMUA_Achr8P24990_001	Banana	cytosol	69.54	73.23
OQU87588	Sorghum	cytosol	21.82	70.54
PGSC0003DMT400010943	Potato	nucleus	47.48	68.28
KRH64428	Soybean	cytosol, mitochondrion, nucleus	64.51	67.59
VIT_16s0098g01760.t01	Wine grape	cytosol, mitochondrion, nucleus	64.51	66.75
Solyc01g006110.2.1	Tomato	cytosol	63.55	65.43
OQU89556	Sorghum	mitochondrion	21.58	65.22
PGSC0003DMT400081985	Potato	cytosol, mitochondrion, nucleus	63.31	65.19
CDY19650	Canola	cytosol	62.83	64.69
Bra003091.1-P	Field mustard	nucleus	62.83	64.69
CDY50498	Canola	cytosol	60.91	64.3
KRH53508	Soybean	endoplasmic reticulum, golgi, plastid	64.99	64.07
AT5G53000.1	Thale cress	cytosol	60.67	62.47
KXG25489	Sorghum	cytosol, mitochondrion	33.57	60.09
KRH05100	Soybean	cytosol, endoplasmic reticulum, nucleus	9.59	59.7
CDX96173	Canola	cytosol	34.53	58.06
KRH75240	Soybean	cytosol	10.07	51.85
GSMUA_Achr4P09110_001	Banana	cytosol, golgi	16.31	48.23

Protein Annotations

Gene3D:1.25.40.540	MapMan:35.1	EntrezGene:8069286	UniProt:C5Y466	EnsemblPlants:EES07947	ProteinID:EES07947
ProteinID:EES07947.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009966	GO:GO:0009987	GO:GO:0019538	GO:GO:0019888
GO:GO:0030234	GO:GO:0035303	GO:GO:0043666	GO:GO:0050790	GO:GO:0051721	InterPro:IPR038511
PFAM:PF04177	PANTHER:PTHR10933	PANTHER:PTHR10933:SF9	EnsemblPlantsGene:SORBI_3005G029100	unigene:Sbi.18996	InterPro:TAP42/TAP46-like_sf
InterPro:TAP46-like	UniParc:UPI0001A861C0	RefSeq:XP_002448959.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:2592608..2598027

Molecular Weight (calculated)

46985.5 Da

IEP (calculated)

4.875

GRAVY (calculated)

-0.700

Length

417 amino acids

Sequence
(BLAST)

001: MVDVEEVGNK MQSQMRLHAE PEDDAAADLP LPALFDRASR IHALASSSAL DQDGIRTGVD LLRRCDEMVS KLGLFSPNET KEDVSTANLK YLLVPYYLAE
101: MTEKIAQEDR IPVLKASQDH LKEFIALCEV LELIPEDELE LSRQKQPDTM ANRRAQKVAR FKRQKAAETK LQEIRERKER RGRSLRAAAL SAPIEAGEED
201: DLEDDGEEER EAWLATISLA LCKAFDLLDM LKKEEEMLLA VKERKAKDGN AFAREMLDER TKKAEAWHHN AANRVVYSKP ADPITCATFA QDVIEGRASV
301: SQAHEHKHQP LIFGPASLVG GGLTSERERM AAQVFQPSYR MPTMSIEEAG LREMKIMEKW QERTAEIMKE ANSAWHKDGT SSAQEDEDAE EAKARAWDDW
401: KDDNPRGAGN KKLTPCG

Best Arabidopsis Sequence Match ( AT5G53000.1 )
(BLAST)

001: MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK
101: LKEFFSFCEA MELVPDEELE ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD IPDDDSEEER EAWLSSINLA
201: ICKAIDLLEM LKREEEMLSA IKERQLKDGE GGFSRDALDD RTKKAETWHR DAAARIQYSK PAQPITCATF AQDVLEGRAS VSQGHEHKNQ PLIFGPASIV
301: GGPLSTERER MIAQVFQPSH RMPTMCIEDA GLTEMNIMND WQEQTKKAIE EATTSWYNDK PLRRKEEDEE DDDEDEEAVM KARAFDDWKD DNPRGAGNKK
401: LTPCG

Arabidopsis Description

TAP46PP2A regulatory subunit TAP46 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.