CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64428	Soybean	cytosol, mitochondrion, nucleus	85.19	17.34
KRH53508	Soybean	endoplasmic reticulum, golgi, plastid	83.95	16.08
CDY19650	Canola	cytosol	67.9	13.58
CDY50498	Canola	cytosol	65.43	13.42
Bra003091.1-P	Field mustard	nucleus	65.43	13.09
AT5G53000.1	Thale cress	cytosol	64.2	12.84
VIT_16s0098g01760.t01	Wine grape	cytosol, mitochondrion, nucleus	62.96	12.66
Solyc01g006110.2.1	Tomato	cytosol	61.73	12.35
PGSC0003DMT400081985	Potato	cytosol, mitochondrion, nucleus	59.26	11.85
HORVU5Hr1G043520.1	Barley	nucleus	54.32	10.63
TraesCS5D01G142100.1	Wheat	nucleus	54.32	10.63
TraesCS5B01G134400.1	Wheat	nucleus	54.32	10.63
TraesCS5A01G135500.1	Wheat	nucleus	54.32	10.63
EES07947	Sorghum	cytosol	51.85	10.07
Zm00001d004976_P002	Maize	cytosol, mitochondrion, nucleus	51.85	9.81
Os11t0141000-02	Rice	cytosol	50.62	9.81
Os12t0137500-01	Rice	cytosol	50.62	9.81
Zm00001d052462_P001	Maize	cytosol, mitochondrion, nucleus	50.62	9.69
KXG25489	Sorghum	cytosol, mitochondrion	14.81	5.15
PGSC0003DMT400010943	Potato	nucleus	7.41	2.07
KRH05100	Soybean	cytosol, endoplasmic reticulum, nucleus	1.23	1.49
OQU89556	Sorghum	mitochondrion	2.47	1.45
CDX96173	Canola	cytosol	1.23	0.4
OQU87588	Sorghum	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.40.540	MapMan:35.1	EMBL:ACUP02000170	EnsemblPlantsGene:GLYMA_01G072500	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009966
GO:GO:0009987	GO:GO:0019538	GO:GO:0019888	GO:GO:0030234	GO:GO:0035303	GO:GO:0043666
GO:GO:0050790	GO:GO:0051721	InterPro:IPR038511	UniProt:K7K2D5	EnsemblPlants:KRH75240	ProteinID:KRH75240
ProteinID:KRH75240.1	PFAM:PF04177	PANTHER:PTHR10933	PANTHER:PTHR10933:SF9	InterPro:TAP42/TAP46-like_sf	InterPro:TAP46-like
UniParc:UPI000296539A	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:13391747..13392818

Molecular Weight (calculated)

9186.9 Da

IEP (calculated)

4.343

GRAVY (calculated)

-0.410

Length

81 amino acids

Sequence
(BLAST)

1: MDDLPLSALF EQARKIHTTT TDSSTDQEVV KKGCEALHRC EDMVNNLGLF SPNETKEDIN TTNLKYILVP MELFPKEEVC V

Best Arabidopsis Sequence Match ( AT5G53000.1 )
(BLAST)

001: MGGLAMEEMP LSVLFEQARK IHLAASESGV DQDVVKKGCE MFQKCEDMIG KLALFSSNET KEDISTNNLK YLLVPYYLAE LTEKIIQEDR IQIVKASYAK
101: LKEFFSFCEA MELVPDEELE ASSRGGSGAP ADRRALKIAR FKRQKAAEAK LLEIKERKER RGRSTKASAL STPVESGEDD IPDDDSEEER EAWLSSINLA
201: ICKAIDLLEM LKREEEMLSA IKERQLKDGE GGFSRDALDD RTKKAETWHR DAAARIQYSK PAQPITCATF AQDVLEGRAS VSQGHEHKNQ PLIFGPASIV
301: GGPLSTERER MIAQVFQPSH RMPTMCIEDA GLTEMNIMND WQEQTKKAIE EATTSWYNDK PLRRKEEDEE DDDEDEEAVM KARAFDDWKD DNPRGAGNKK
401: LTPCG

Arabidopsis Description

TAP46PP2A regulatory subunit TAP46 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.