Factsheet for GSMUA_AchrUn_randomP12470_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P27100_001	Banana	mitochondrion	81.48	44.15
Os09t0284400-01	Rice	mitochondrion	74.69	40.07
Zm00001d005513_P001	Maize	mitochondrion	73.46	39.27
EER96498	Sorghum	mitochondrion	73.46	39.02
HORVU5Hr1G053680.2	Barley	mitochondrion	72.22	38.87
TraesCS5A01G176600.3	Wheat	mitochondrion	72.22	38.87
TraesCS5B01G173300.1	Wheat	mitochondrion	72.22	38.87
TraesCS5D01G180300.1	Wheat	mitochondrion	71.6	38.54
Os08t0338700-01	Rice	mitochondrion	69.75	36.33
Zm00001d050123_P001	Maize	mitochondrion	72.22	35.24
KXG25038	Sorghum	plastid	72.22	32.59

Protein Annotations

MapMan:19.1.3.3	Gene3D:2.30.22.10	Gene3D:3.90.20.20	GO:GO:0000166	GO:GO:0000774	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0030234
GO:GO:0042803	GO:GO:0050790	GO:GO:0051087	EnsemblPlantsGene:GSMUA_AchrUn_randomG12470_001	EnsemblPlants:GSMUA_AchrUn_randomP12470_001	EnsemblPlants:GSMUA_AchrUn_randomT12470_001
InterPro:GrpE	InterPro:GrpE_coiled_coil	InterPro:GrpE_head	InterPro:IPR009012	InterPro:IPR013805	UniProt:M0U8K6
HAMAP:MF_01151	PFAM:PF01025	PRINTS:PR00773	PANTHER:PTHR21237	PANTHER:PTHR21237:SF28	SUPFAM:SSF51064
SUPFAM:SSF58014	UniParc:UPI00029682D0	:	:	:	:

Description

Putative Protein grpE [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG12470_001]

Coordinates

chrchrUn_random:+:59279722..59283526

Molecular Weight (calculated)

17901.2 Da

IEP (calculated)

4.922

GRAVY (calculated)

-0.359

Length

162 amino acids

Sequence
(BLAST)

001: MQDKVLRSCA EVENVIDRTK REAENSKKFA IQSFAKSLLD VADNLGRASS VVKESFSKID ESKDSVGAVP LIKTLLEGVE MTDKQLVEVF RKFGVEKFDP
101: LDEQFDPHRH LAAFQIPDSS KPPGTVAVVL KSGYLLYDRV IRPAEVGVTE ALDDGTDQST SK

Best Arabidopsis Sequence Match ( AT4G26780.1 )
(BLAST)

001: MLVLRILSRV TRNAGIRSSL SAVTLPARNQ TPVFSSRFHS LAHDFSHKLV PAQMSMMDSF ALQRFNFSSS TSPESDEKKT HTEASKTSEE KPTAEANQPG
101: LDSESKDSVT DSAKRKRKGA KGAASSSSES DSESDDDELS ADDLVKLVAE KEELLSEKEE EIKQLKDKVL RTYAEMENVM DRTRRDAENT KKYAVQNFAK
201: SLLDVADNLG RASSVVKESF SKLDTSEDSA GAAPLLKTLL EGVEMTEKQL AEVFKKFGME KYDPINEPFD PNRHNAVFQV PDASKPEGTV AHVLKSGYTL
301: YDRVIRPAEV GVTQGGENQE EKKESDA

Arabidopsis Description

AR192GrpE protein homolog 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LB47]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.