Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G032110.2 | Barley | cytosol | 67.06 | 79.17 |
| HORVU5Hr1G020140.1 | Barley | cytosol | 61.18 | 71.23 |
| Solyc07g006270.2.1 | Tomato | cytosol | 61.18 | 67.53 |
| OQU85293 | Sorghum | cytosol | 61.18 | 67.53 |
| Os04t0498200-01 | Rice | cytosol | 58.82 | 64.94 |
| KRH18933 | Soybean | cytosol | 56.47 | 62.34 |
| GSMUA_Achr3P04880_001 | Banana | cytosol | 56.47 | 62.34 |
| AT4G28060.1 | Thale cress | mitochondrion | 56.47 | 61.54 |
| AT5G57815.1 | Thale cress | cytosol | 55.29 | 60.26 |
| CDX89207 | Canola | cytosol | 54.12 | 58.97 |
| Bra026287.1-P | Field mustard | cytosol | 54.12 | 58.97 |
| VIT_11s0037g01120.t01 | Wine grape | cytosol | 52.94 | 58.44 |
| CDY29877 | Canola | cytosol | 52.94 | 57.69 |
| Bra024231.1-P | Field mustard | cytosol | 52.94 | 57.69 |
| PGSC0003DMT400029025 | Potato | mitochondrion | 63.53 | 57.45 |
| KRH02965 | Soybean | cytosol | 57.65 | 56.32 |
| CDY19008 | Canola | extracellular | 54.12 | 46.94 |
| Zm00001d051055_P003 | Maize | mitochondrion | 58.82 | 33.33 |
| HORVU2Hr1G029990.1 | Barley | plasma membrane | 61.18 | 31.14 |
| CDX92861 | Canola | cytosol, extracellular, mitochondrion, plastid | 54.12 | 26.29 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G085960.3 | EnsemblPlantsGene:HORVU2Hr1G085960 | Gene3D:1.10.10.140 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | InterPro:Cyt_c_oxidase_su6B | InterPro:Cyt_c_oxidase_su6B_sf | InterPro:IPR036549 | PANTHER:PTHR11387 |
| PANTHER:PTHR11387:SF30 | PFAM:PD015172 | PFAM:PF02297 | PFscan:PS51808 | SUPFAM:SSF47694 | UniParc:UPI000B47D6A7 |
| UniProt:A0A287IS04 | MapMan:2.4.5.1.7 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:620803295..620804062
Molecular Weight (calculated)
9715.5 Da
IEP (calculated)
7.384
GRAVY (calculated)
-0.576
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: ILPPPHVPDS DIEIKTAPAD FRFPTTNQTR HCFTRYVEFH RCVSAKGDEA AECDKFAKYY RSLCPAEWLP EGKKYITQIT SPSVP
1: MEDEIELKTA PADFRFPTTN QTRHCFTRYI EFHRCTTAKG EESNDCERFA KYYRALCPGE WVDKWNEQRE SGTFPGPL
Arabidopsis Description
COX6B-2Cytochrome c oxidase subunit [Source:UniProtKB/TrEMBL;Acc:A0A178UHL9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.