Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G032110.2 | Barley | cytosol | 71.23 | 72.22 |
| Solyc07g006270.2.1 | Tomato | cytosol | 67.12 | 63.64 |
| OQU85293 | Sorghum | cytosol | 67.12 | 63.64 |
| Os04t0498200-01 | Rice | cytosol | 65.75 | 62.34 |
| HORVU2Hr1G085960.3 | Barley | cytosol | 71.23 | 61.18 |
| AT5G57815.1 | Thale cress | cytosol | 61.64 | 57.69 |
| AT4G28060.1 | Thale cress | mitochondrion | 61.64 | 57.69 |
| GSMUA_Achr3P04880_001 | Banana | cytosol | 60.27 | 57.14 |
| KRH18933 | Soybean | cytosol | 60.27 | 57.14 |
| CDX89207 | Canola | cytosol | 60.27 | 56.41 |
| Bra026287.1-P | Field mustard | cytosol | 60.27 | 56.41 |
| CDY29877 | Canola | cytosol | 58.9 | 55.13 |
| Bra024231.1-P | Field mustard | cytosol | 58.9 | 55.13 |
| VIT_11s0037g01120.t01 | Wine grape | cytosol | 57.53 | 54.55 |
| PGSC0003DMT400029025 | Potato | mitochondrion | 68.49 | 53.19 |
| KRH02965 | Soybean | cytosol | 60.27 | 50.57 |
| CDY19008 | Canola | extracellular | 60.27 | 44.9 |
| Zm00001d051055_P003 | Maize | mitochondrion | 63.01 | 30.67 |
| HORVU2Hr1G029990.1 | Barley | plasma membrane | 64.38 | 28.14 |
| CDX92861 | Canola | cytosol, extracellular, mitochondrion, plastid | 60.27 | 25.14 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G020140.1 | EnsemblPlantsGene:HORVU5Hr1G020140 | Gene3D:1.10.10.140 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | InterPro:Cyt_c_oxidase_su6B | InterPro:Cyt_c_oxidase_su6B_sf | InterPro:IPR036549 | PANTHER:PTHR11387 |
| PANTHER:PTHR11387:SF28 | PFAM:PD015172 | PFAM:PF02297 | SUPFAM:SSF47694 | UniParc:UPI000B4764CA | UniProt:A0A287QK03 |
| MapMan:2.4.5.1.7 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:90692152..90692691
Molecular Weight (calculated)
8707.3 Da
IEP (calculated)
7.964
GRAVY (calculated)
-0.481
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: IYQIEIKTTP ADFCFPTTNH TRHYFTRYVE FHRCVSAKGD EAAKCEKFAK YYRSLCPAEW LDLQIHQNQV SLF
1: MEDEIELKTA PADFRFPTTN QTRHCFTRYI EFHRCTTAKG EDANECERFA KYYRALCPGE WVDKWNEQRE TGTFPGPL
Arabidopsis Description
COX6B-3Cytochrome c oxidase subunit [Source:UniProtKB/TrEMBL;Acc:A0A178V4L0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.