Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85293 | Sorghum | cytosol | 37.33 | 72.73 |
| HORVU7Hr1G032110.2 | Barley | cytosol | 32.0 | 66.67 |
| Os04t0498200-01 | Rice | cytosol | 33.33 | 64.94 |
| KRH18933 | Soybean | cytosol | 32.67 | 63.64 |
| HORVU5Hr1G020140.1 | Barley | cytosol | 30.67 | 63.01 |
| Solyc07g006270.2.1 | Tomato | cytosol | 32.0 | 62.34 |
| AT4G28060.1 | Thale cress | mitochondrion | 32.0 | 61.54 |
| GSMUA_Achr3P04880_001 | Banana | cytosol | 31.33 | 61.04 |
| AT5G57815.1 | Thale cress | cytosol | 30.67 | 58.97 |
| CDY29877 | Canola | cytosol | 30.67 | 58.97 |
| CDX89207 | Canola | cytosol | 30.67 | 58.97 |
| Bra026287.1-P | Field mustard | cytosol | 30.67 | 58.97 |
| Bra024231.1-P | Field mustard | cytosol | 30.67 | 58.97 |
| HORVU2Hr1G085960.3 | Barley | cytosol | 33.33 | 58.82 |
| VIT_11s0037g01120.t01 | Wine grape | cytosol | 29.33 | 57.14 |
| KRH02965 | Soybean | cytosol | 32.67 | 56.32 |
| PGSC0003DMT400029025 | Potato | mitochondrion | 34.0 | 54.26 |
| CDY19008 | Canola | extracellular | 31.33 | 47.96 |
| Zm00001d029393_P001 | Maize | plastid | 36.67 | 31.98 |
| CDX92861 | Canola | cytosol, extracellular, mitochondrion, plastid | 35.33 | 30.29 |
| Zm00001d047218_P002 | Maize | nucleus | 36.0 | 18.24 |
Protein Annotations
| Gene3D:1.10.10.140 | EntrezGene:100272303 | MapMan:2.4.5.1.7 | UniProt:A0A1D6Q4N8 | ProteinID:AQK53521.1 | InterPro:Cyt_c_oxidase_su6B |
| InterPro:Cyt_c_oxidase_su6B_sf | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| InterPro:IPR036549 | PFAM:PD015172 | PFAM:PF02297 | PFscan:PS51808 | PANTHER:PTHR11387 | PANTHER:PTHR11387:SF30 |
| SUPFAM:SSF47694 | SignalP:SignalP-noTM | UniParc:UPI0008450DA9 | EnsemblPlantsGene:Zm00001d051055 | EnsemblPlants:Zm00001d051055_P003 | EnsemblPlants:Zm00001d051055_T003 |
| SEG:seg | : | : | : | : | : |
Description
Cytochrome c oxidase polypeptide VIb%3B Cytochrome c oxidase polypeptide VIb isoform 1%3B Cytochrome c oxidase polypeptide VIb isoform 2
Coordinates
chr4:-:139227891..139235098
Molecular Weight (calculated)
16568.8 Da
IEP (calculated)
8.937
GRAVY (calculated)
-0.317
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQKSRGFRT LGSGLSRLLL SLQGRLAEAI VVDPTSSRVP DYNQPSPPPP SAAPPSAANT PLSRPLVLLL QQDGGGEETL PLRLLIEIKT APADFRFPTT
101: NQTRHCFTRY VEYHRCLNAK GDDAGVCEKF AKYYRSLCPG EWVSISFSFW
101: NQTRHCFTRY VEYHRCLNAK GDDAGVCEKF AKYYRSLCPG EWVSISFSFW
001: MADAVNAQTP SLSEQYHLEK EVKQDTSAKP VEVKEVAPEV TTQAEEVKTE QAKEESPVEE AVSVVEEKSE SAPESTEVAS EAPAAAEDNA EETPAAAEEN
101: NDENASEEVA EETPDEIKLE TAPADFRFPT TNQTRHCFTR YVEYHRCVAA KGDDAPECDK FAKFYRSLCP SEWVDRWNEQ RENGTFPGPL P
101: NDENASEEVA EETPDEIKLE TAPADFRFPT TNQTRHCFTR YVEYHRCVAA KGDDAPECDK FAKFYRSLCP SEWVDRWNEQ RENGTFPGPL P
Arabidopsis Description
COX6B-1COX6B [Source:UniProtKB/TrEMBL;Acc:A0A178WPQ4]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.