Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- vacuole 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G118860.1 | Barley | plastid | 34.46 | 87.14 |
| HORVU3Hr1G034540.16 | Barley | plastid | 49.15 | 29.29 |
| HORVU4Hr1G032690.2 | Barley | nucleus, plastid | 49.72 | 28.48 |
| HORVU7Hr1G118740.3 | Barley | nucleus | 51.41 | 27.58 |
| HORVU4Hr1G080890.1 | Barley | nucleus | 32.2 | 16.06 |
| Os10t0544200-01 | Rice | nucleus | 31.64 | 14.74 |
| HORVU4Hr1G087590.1 | Barley | nucleus | 19.21 | 13.23 |
| HORVU2Hr1G066000.7 | Barley | nucleus | 20.34 | 13.14 |
| HORVU3Hr1G096460.5 | Barley | nucleus | 27.12 | 12.66 |
| HORVU4Hr1G087610.1 | Barley | nucleus | 16.95 | 11.95 |
| HORVU3Hr1G005500.3 | Barley | cytosol, nucleus | 18.64 | 10.19 |
| HORVU2Hr1G066100.1 | Barley | cytosol, nucleus | 17.51 | 10.16 |
| HORVU7Hr1G074490.3 | Barley | nucleus | 27.12 | 8.99 |
| HORVU2Hr1G068960.2 | Barley | nucleus | 14.69 | 8.5 |
| HORVU6Hr1G012730.1 | Barley | nucleus | 22.03 | 6.99 |
| HORVU6Hr1G012760.1 | Barley | nucleus | 22.03 | 6.99 |
| HORVU2Hr1G066090.2 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A287WPB5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | EnsemblPlantsGene:HORVU7Hr1G062400 | EnsemblPlants:HORVU7Hr1G062400.4 | InterPro:IPR011598 |
| InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF15 | SMART:SM00353 |
| SUPFAM:SSF47459 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B477F3D | InterPro:bHLH_dom | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:-:300518723..300523227
Molecular Weight (calculated)
19329.9 Da
IEP (calculated)
11.746
GRAVY (calculated)
-0.290
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: PAPSQISTHR AGAMAFDAFK ARRMGPPRGH LALLLLLALS TALAPGQAAA TGVFEVRRKF LRHDGSGKHL ANLRAHDVRR HGRSLGACKV EPGLAAGADG
101: GAFGQGQMSA MPVSRKKRVE GMPSKNLMAE CRRRKRLNDC LSMLRSVVPK ISKMDMTSFL GDTIDYMKEL LERIRRL
101: GAFGQGQMSA MPVSRKKRVE GMPSKNLMAE CRRRKRLNDC LSMLRSVVPK ISKMDMTSFL GDTIDYMKEL LERIRRL
001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKIVE TRILELIYAA RQNRDCYYLL
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKIVE TRILELIYAA RQNRDCYYLL
Arabidopsis Description
BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.