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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • vacuole 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G118860.1 Barley plastid 21.55 91.43
HORVU7Hr1G118740.3 Barley nucleus 74.41 66.97
VIT_00s2739g00010.t01 Wine grape cytosol 17.85 63.1
TraesCS7A01G543300.1 Wheat nucleus 68.35 61.7
TraesCS7D01G529200.1 Wheat nucleus 69.7 61.24
TraesCS7B01G465400.1 Wheat nucleus 68.35 58.33
Zm00001d036382_P001 Maize nucleus 58.59 55.06
Zm00001d014814_P002 Maize plastid 63.97 51.77
HORVU7Hr1G062400.4 Barley plastid 29.29 49.15
EER88977 Sorghum plastid 61.28 47.64
HORVU4Hr1G032690.2 Barley nucleus, plastid 38.72 37.22
VIT_11s0037g01310.t01 Wine grape cytosol 12.46 31.62
HORVU4Hr1G080890.1 Barley nucleus 37.37 31.27
HORVU3Hr1G096460.5 Barley nucleus 27.95 21.9
HORVU4Hr1G087590.1 Barley nucleus 14.48 16.73
HORVU7Hr1G074490.3 Barley nucleus 27.27 15.17
HORVU3Hr1G005500.3 Barley cytosol, nucleus 16.16 14.81
HORVU4Hr1G087610.1 Barley nucleus 12.46 14.74
HORVU2Hr1G066000.7 Barley nucleus 13.47 14.6
HORVU2Hr1G066100.1 Barley cytosol, nucleus 14.81 14.43
HORVU2Hr1G068960.2 Barley nucleus 12.79 12.42
HORVU6Hr1G012760.1 Barley nucleus 22.9 12.19
HORVU6Hr1G012730.1 Barley nucleus 22.9 12.19
HORVU2Hr1G066090.2 Barley cytosol 4.71 9.15
Protein Annotations
MapMan:15.5.32Gene3D:4.10.280.10UniProt:A0A287KQJ1ncoils:CoilGO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfEnsemblPlantsGene:HORVU3Hr1G034540EnsemblPlants:HORVU3Hr1G034540.16InterPro:IPR011598
InterPro:IPR036638PFAM:PF00010PFscan:PS50888PANTHER:PTHR31945PANTHER:PTHR31945:SF15SMART:SM00353
SUPFAM:SSF47459SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B483031InterPro:bHLH_domSEG:seg
Description
No Description!
Coordinates
chrchr3H:+:187892013..187896377
Molecular Weight (calculated)
32621.9 Da
IEP (calculated)
10.526
GRAVY (calculated)
-0.325
Length
297 amino acids
Sequence
(BLAST)
001: PAPSQISTHR AGAMAFDAFK ARRMGPPRGR LALLLLLALS AVLAPGRAAA TGVFEVRRKF LRHDGSGQHL ANLRAHDARR HGRSLSACKV EPGLAAGADG
101: GAFGQGQMSV MPASRKKRVE GMPSKNLMAE RRRRKRLNDR LSMLRSIVPK ISKMDRTSIL GDTINYMKEL LERIRRLQEE MDGPEAAAAA PPLLSVFREV
201: NPNEMLARNT PKFEVERKEG EEGDTRVEIY CVAKPGLLLS MVSTLNTLGL DIQKCVVSCF NDFTMHASCS EMQREMMSAD AIKQELFKNA GYGGGCL
Best Arabidopsis Sequence Match ( AT5G10570.1 )
(BLAST)
001: METELTQLRK QESNNLNGVN GGFMAIDQFV PNDWNFDYLC FNNLLQEDDN IDHPSSSSLM NLISQPPPLL HQPPQPSSPL YDSPPLSSAF DYPFLEDIIH
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
Arabidopsis Description
BHLH61Transcription factor bHLH61 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.