Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- vacuole 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU7Hr1G118860.1 | Barley | plastid | 21.55 | 91.43 |
HORVU7Hr1G118740.3 | Barley | nucleus | 74.41 | 66.97 |
VIT_00s2739g00010.t01 | Wine grape | cytosol | 17.85 | 63.1 |
TraesCS7A01G543300.1 | Wheat | nucleus | 68.35 | 61.7 |
TraesCS7D01G529200.1 | Wheat | nucleus | 69.7 | 61.24 |
TraesCS7B01G465400.1 | Wheat | nucleus | 68.35 | 58.33 |
Zm00001d036382_P001 | Maize | nucleus | 58.59 | 55.06 |
Zm00001d014814_P002 | Maize | plastid | 63.97 | 51.77 |
HORVU7Hr1G062400.4 | Barley | plastid | 29.29 | 49.15 |
EER88977 | Sorghum | plastid | 61.28 | 47.64 |
HORVU4Hr1G032690.2 | Barley | nucleus, plastid | 38.72 | 37.22 |
VIT_11s0037g01310.t01 | Wine grape | cytosol | 12.46 | 31.62 |
HORVU4Hr1G080890.1 | Barley | nucleus | 37.37 | 31.27 |
HORVU3Hr1G096460.5 | Barley | nucleus | 27.95 | 21.9 |
HORVU4Hr1G087590.1 | Barley | nucleus | 14.48 | 16.73 |
HORVU7Hr1G074490.3 | Barley | nucleus | 27.27 | 15.17 |
HORVU3Hr1G005500.3 | Barley | cytosol, nucleus | 16.16 | 14.81 |
HORVU4Hr1G087610.1 | Barley | nucleus | 12.46 | 14.74 |
HORVU2Hr1G066000.7 | Barley | nucleus | 13.47 | 14.6 |
HORVU2Hr1G066100.1 | Barley | cytosol, nucleus | 14.81 | 14.43 |
HORVU2Hr1G068960.2 | Barley | nucleus | 12.79 | 12.42 |
HORVU6Hr1G012760.1 | Barley | nucleus | 22.9 | 12.19 |
HORVU6Hr1G012730.1 | Barley | nucleus | 22.9 | 12.19 |
HORVU2Hr1G066090.2 | Barley | cytosol | 4.71 | 9.15 |
Protein Annotations
MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A287KQJ1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | EnsemblPlantsGene:HORVU3Hr1G034540 | EnsemblPlants:HORVU3Hr1G034540.16 | InterPro:IPR011598 |
InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF15 | SMART:SM00353 |
SUPFAM:SSF47459 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B483031 | InterPro:bHLH_dom | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:+:187892013..187896377
Molecular Weight (calculated)
32621.9 Da
IEP (calculated)
10.526
GRAVY (calculated)
-0.325
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: PAPSQISTHR AGAMAFDAFK ARRMGPPRGR LALLLLLALS AVLAPGRAAA TGVFEVRRKF LRHDGSGQHL ANLRAHDARR HGRSLSACKV EPGLAAGADG
101: GAFGQGQMSV MPASRKKRVE GMPSKNLMAE RRRRKRLNDR LSMLRSIVPK ISKMDRTSIL GDTINYMKEL LERIRRLQEE MDGPEAAAAA PPLLSVFREV
201: NPNEMLARNT PKFEVERKEG EEGDTRVEIY CVAKPGLLLS MVSTLNTLGL DIQKCVVSCF NDFTMHASCS EMQREMMSAD AIKQELFKNA GYGGGCL
101: GAFGQGQMSV MPASRKKRVE GMPSKNLMAE RRRRKRLNDR LSMLRSIVPK ISKMDRTSIL GDTINYMKEL LERIRRLQEE MDGPEAAAAA PPLLSVFREV
201: NPNEMLARNT PKFEVERKEG EEGDTRVEIY CVAKPGLLLS MVSTLNTLGL DIQKCVVSCF NDFTMHASCS EMQREMMSAD AIKQELFKNA GYGGGCL
001: METELTQLRK QESNNLNGVN GGFMAIDQFV PNDWNFDYLC FNNLLQEDDN IDHPSSSSLM NLISQPPPLL HQPPQPSSPL YDSPPLSSAF DYPFLEDIIH
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
Arabidopsis Description
BHLH61Transcription factor bHLH61 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.