Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s2739g00010.t01 | Wine grape | cytosol | 34.19 | 47.62 |
| VIT_18s0001g08040.t01 | Wine grape | nucleus | 41.03 | 14.37 |
| VIT_00s1312g00010.t01 | Wine grape | nucleus | 39.32 | 13.9 |
| TraesCS7A01G543300.1 | Wheat | nucleus | 35.9 | 12.77 |
| VIT_17s0000g03550.t01 | Wine grape | nucleus | 35.04 | 12.73 |
| Zm00001d036382_P001 | Maize | nucleus | 34.19 | 12.66 |
| HORVU3Hr1G034540.16 | Barley | plastid | 31.62 | 12.46 |
| TraesCS7D01G529200.1 | Wheat | nucleus | 35.9 | 12.43 |
| HORVU7Hr1G118740.3 | Barley | nucleus | 35.04 | 12.42 |
| TraesCS7B01G465400.1 | Wheat | nucleus | 35.04 | 11.78 |
| Zm00001d014814_P002 | Maize | plastid | 35.9 | 11.44 |
| EER88977 | Sorghum | plastid | 36.75 | 11.26 |
| VIT_11s0052g00100.t01 | Wine grape | nucleus | 17.95 | 8.61 |
| VIT_06s0061g00720.t01 | Wine grape | nucleus | 22.22 | 8.28 |
| VIT_01s0127g00650.t01 | Wine grape | nucleus | 11.11 | 7.39 |
| VIT_14s0068g01200.t01 | Wine grape | nucleus | 27.35 | 5.95 |
| VIT_17s0000g00330.t01 | Wine grape | nucleus | 27.35 | 5.82 |
| VIT_01s0244g00130.t01 | Wine grape | nucleus | 24.79 | 5.62 |
| VIT_03s0038g02540.t01 | Wine grape | nucleus | 17.95 | 3.24 |
| VIT_01s0127g00860.t01 | Wine grape | nucleus | 16.24 | 3.1 |
Protein Annotations
| ArrayExpress:VIT_11s0037g01310 | EMBL:FN596499 | EnsemblPlants:VIT_11s0037g01310.t01 | EnsemblPlantsGene:VIT_11s0037g01310 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF6 |
| ProteinID:CCB59809 | ProteinID:CCB59809.1 | UniParc:UPI0002109FDE | UniProt:F6HYP5 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr11:+:10653430..10654096
Molecular Weight (calculated)
13769.9 Da
IEP (calculated)
8.304
GRAVY (calculated)
-0.054
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVGSGQTNL IGIFKELKPN VLLVRNSPKF IVERRNIDTW IEIRCAAKPG STVNTLELLG LEIQYCVISC FNDFSMQAFF LFFLNFYTYV MEEDVCRRKR
101: IKKGKYNSFY KLEEMDL
101: IKKGKYNSFY KLEEMDL
001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
Arabidopsis Description
BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.