Factsheet for TraesCS7B01G465400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G529200.1	Wheat	nucleus	91.67	94.38
TraesCS7A01G543300.1	Wheat	nucleus	87.36	92.4
HORVU7Hr1G118740.3	Barley	nucleus	84.77	89.39
Zm00001d036382_P001	Maize	nucleus	66.38	73.1
Zm00001d014814_P002	Maize	plastid	74.14	70.3
HORVU3Hr1G034540.16	Barley	plastid	58.33	68.35
VIT_00s2739g00010.t01	Wine grape	cytosol	15.8	65.48
EER88977	Sorghum	plastid	71.84	65.44
TraesCS4B01G331900.1	Wheat	nucleus	36.21	41.31
TraesCS4B01G332000.1	Wheat	nucleus	40.23	40.35
TraesCS3B01G070400.1	Wheat	nucleus	32.18	36.72
VIT_11s0037g01310.t01	Wine grape	cytosol	11.78	35.04
TraesCS3B01G476000.1	Wheat	nucleus	26.44	24.27
TraesCS2B01G289700.2	Wheat	nucleus	16.95	21.53
TraesCS4B01G364800.1	Wheat	nucleus	14.37	19.53
TraesCS3B01G018400.1	Wheat	nucleus	14.66	19.25
TraesCS4B01G051500.2	Wheat	nucleus	24.43	17.17
TraesCS7B01G211600.1	Wheat	nucleus	25.57	16.92
TraesCS2B01G289900.1	Wheat	nucleus	13.51	16.91
TraesCS2B01G298600.1	Wheat	nucleus	13.79	13.99
TraesCS6B01G095600.1	Wheat	nucleus	22.13	13.92
TraesCS6B01G095700.1	Wheat	nucleus	22.13	13.92

Protein Annotations

EnsemblPlants:TraesCS7B01G465400.1	EnsemblPlantsGene:TraesCS7B01G465400	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR31945	PANTHER:PTHR31945:SF15	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	TIGR:cd00083	TIGR:cd04873	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chr7B:+:721806770..721808182

Molecular Weight (calculated)

37428.7 Da

IEP (calculated)

5.279

GRAVY (calculated)

-0.311

Length

348 amino acids

Sequence
(BLAST)

001: MELDEQAFLE ELFSLRRDAT AAWECNAMGD FFSPACGAGG GGGGAMDCFQ ERHQPTVSVL PTFTASFEQP HPQQHQHQHQ QAAAVASGGF DCLSEVYGGG
101: PFPNAVGGGY GEMGFLAAMD PKAALAAEGA GLGACKVEPG LAAAADGGAF GPGPMAALPQ GPASRKKRVE GMPSKNLMAE RRRRKRLNDR LSMLRSVVPK
201: ISKMDRTSIL GDTIDYMKEL LERIRRLQEE MEEACPHQHP GPAAPLLSVF RELNPNEMLA RNTPKFEVER KEEGDTRVEV YCAAKPGLLL STVGTLDTLG
301: LDIQQCVVSC FNDFAMHASC SEMQREMISA DAIKQELFKN AGYGGGCL

Best Arabidopsis Sequence Match ( AT5G65640.1 )
(BLAST)

001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L

Arabidopsis Description

BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.