Factsheet for TraesCS7A01G543300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G529200.1	Wheat	nucleus	94.53	92.01
HORVU7Hr1G118740.3	Barley	nucleus	88.75	88.48
TraesCS7B01G465400.1	Wheat	nucleus	92.4	87.36
Zm00001d036382_P001	Maize	nucleus	71.12	74.05
Zm00001d014814_P002	Maize	plastid	77.51	69.48
HORVU3Hr1G034540.16	Barley	plastid	61.7	68.35
VIT_00s2739g00010.t01	Wine grape	cytosol	17.02	66.67
EER88977	Sorghum	plastid	76.29	65.71
TraesCS5A01G503300.1	Wheat	nucleus	44.07	41.08
TraesCS5A01G503500.1	Wheat	nucleus	42.86	40.06
TraesCS3A01G057900.1	Wheat	nucleus	39.51	39.76
TraesCS5A01G503400.1	Wheat	nucleus	41.03	37.4
TraesCS3A01G058000.1	Wheat	nucleus	33.43	36.67
VIT_11s0037g01310.t01	Wine grape	cytosol	12.77	35.9
TraesCS3A01G442200.1	Wheat	nucleus	27.96	24.02
TraesCS5A01G533900.1	Wheat	nucleus	14.59	20.34
TraesCS5A01G533200.1	Wheat	nucleus	14.89	19.14
TraesCS3A01G028200.3	Wheat	nucleus	15.2	18.45
TraesCS2A01G271700.1	Wheat	nucleus	14.89	17.63
TraesCS4A01G263300.2	Wheat	nucleus	25.53	17.21
TraesCS7A01G311800.1	Wheat	nucleus	26.75	16.89
TraesCS3A01G442600.1	Wheat	nucleus	13.07	14.73
TraesCS2A01G281200.1	Wheat	nucleus	14.29	13.91
TraesCS6A01G071200.1	Wheat	nucleus	21.88	13.0
TraesCS6A01G071300.1	Wheat	nucleus	21.58	12.91

Protein Annotations

EnsemblPlants:TraesCS7A01G543300.1	EnsemblPlantsGene:TraesCS7A01G543300	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR31945	PANTHER:PTHR31945:SF15	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	TIGR:cd00083	TIGR:cd04873	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chr7A:+:720130601..720131944

Molecular Weight (calculated)

35475.5 Da

IEP (calculated)

4.842

GRAVY (calculated)

-0.182

Length

329 amino acids

Sequence
(BLAST)

001: MELDEQAFLE ELFSLRRDAT AAWECNAMGD FFSPACAGAA AMDCFQERHQ PTVSVLPTFT ASFDHPQQQA GVTAAGGFDC LSEVYGGGPF PNAVGGGYGE
101: MGFLAAMDPK AAAAAALVEG GGLGACKVEP GLAAVDGGAF GSAVPAPASR KKRVEGMPSK NLMAERRRRK RLNDRLSMLR SVVPKISKMD RTSILGDTID
201: YMKELLERIR RLQEEMEEPH AGPAAAPLLS VFRELNPNEM LARNTPKFEV ERKEEDTRVE IYCAAKPGLL LSTVSTLDTL GLDIQQCVVS CFNDFAMHAS
301: CSEMQREMIS ADAIKQELFK NAGYGGGCL

Best Arabidopsis Sequence Match ( AT5G65640.1 )
(BLAST)

001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L

Arabidopsis Description

BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.