Factsheet for Zm00001d036382_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014814_P002	Maize	plastid	83.54	71.93
TraesCS7A01G543300.1	Wheat	nucleus	74.05	71.12
HORVU7Hr1G118740.3	Barley	nucleus	73.73	70.61
TraesCS7D01G529200.1	Wheat	nucleus	75.0	70.12
EER88977	Sorghum	plastid	81.96	67.8
TraesCS7B01G465400.1	Wheat	nucleus	73.1	66.38
VIT_00s2739g00010.t01	Wine grape	cytosol	16.14	60.71
HORVU3Hr1G034540.16	Barley	plastid	55.06	58.59
Zm00001d027546_P001	Maize	nucleus	47.15	40.49
VIT_11s0037g01310.t01	Wine grape	cytosol	12.66	34.19
Zm00001d042263_P001	Maize	nucleus	28.8	21.77
Zm00001d007382_P001	Maize	nucleus	29.43	17.92
Zm00001d024522_P001	Maize	nucleus	14.56	17.83
Zm00001d049294_P001	Maize	nucleus	29.11	17.76
Zm00001d025141_P003	Maize	nucleus	13.92	16.79
Zm00001d004095_P001	Maize	nucleus	14.87	15.31
Zm00001d004007_P001	Maize	nucleus	15.19	13.41
Zm00001d025205_P001	Maize	nucleus	15.19	12.6
Zm00001d053895_P001	Maize	nucleus	20.89	10.56

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A1D6LMT3	ProteinID:AQK80880.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR31945	PANTHER:PTHR31945:SF15	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI0008442A7F	EnsemblPlantsGene:Zm00001d036382	EnsemblPlants:Zm00001d036382_P001	EnsemblPlants:Zm00001d036382_T001	InterPro:bHLH_dom	SEG:seg

Description

Transcription factor bHLH93

Coordinates

chr6:-:86301797..86303653

Molecular Weight (calculated)

34050.8 Da

IEP (calculated)

4.579

GRAVY (calculated)

-0.184

Length

316 amino acids

Sequence
(BLAST)

001: MELDEQAFLE EILSLRRDAW DCNVSMGDLF APAAAAAIDC SFHNQQAPTV SVLPTFTASC AEPPAFDCLS EVYGAAAAFG GPNAGDEMAF LHVAEPKEAL
101: QLDNNAGLGV CKVEPGLVES DGGGAAAPTP APAASKKKRV EGMPSKNLMA ERRRRKRLND RLSMLRSVVP KISKMDRTSI LGDTIDYMKE LLERIKLLQE
201: EIEQQGEAPA GMLSVFRELN PNEMVARNTP KLDVERKEGA DTRVEIYCGA SARPGLLLST VSTLDALGLD IQQCVVSCFN DFGMHASCSE MQRDMISADA
301: IKQELLKTAG YGGGCM

Best Arabidopsis Sequence Match ( AT5G65640.1 )
(BLAST)

001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L

Arabidopsis Description

BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.