Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004007_P001 | |
| Zm00001d011847_P001 | |
| Zm00001d025205_P001 | |
| Zm00001d042062_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG26070 | Sorghum | nucleus | 79.0 | 82.24 |
| Zm00001d004007_P001 | Maize | nucleus | 75.85 | 80.73 |
| TraesCS2A01G281200.1 | Wheat | nucleus | 54.59 | 61.54 |
| TraesCS2D01G280100.1 | Wheat | nucleus | 54.59 | 61.36 |
| TraesCS2B01G298600.1 | Wheat | nucleus | 55.12 | 61.22 |
| HORVU2Hr1G068960.2 | Barley | nucleus | 46.46 | 57.84 |
| Os04t0381700-00 | Rice | nucleus | 51.44 | 55.68 |
| GSMUA_Achr6P27600_001 | Banana | nucleus | 35.96 | 45.07 |
| KRH22827 | Soybean | nucleus | 27.82 | 32.82 |
| Solyc06g051550.2.1 | Tomato | cytosol | 25.98 | 32.57 |
| PGSC0003DMT400048941 | Potato | nucleus | 26.51 | 32.37 |
| AT2G28160.1 | Thale cress | nucleus | 26.25 | 31.45 |
| VIT_06s0061g00720.t01 | Wine grape | nucleus | 25.72 | 31.21 |
| Bra000495.1-P | Field mustard | nucleus | 24.93 | 30.84 |
| CDY04543 | Canola | nucleus | 25.46 | 30.7 |
| CDY31199 | Canola | nucleus | 25.2 | 30.67 |
| KRH26533 | Soybean | nucleus | 25.72 | 30.43 |
| Bra011972.1-P | Field mustard | nucleus | 25.2 | 30.38 |
| CDX71377 | Canola | nucleus | 25.2 | 30.38 |
| KRH30560 | Soybean | nucleus | 24.67 | 30.13 |
| CDX83286 | Canola | nucleus | 24.67 | 30.03 |
| KRH25108 | Soybean | nucleus | 22.31 | 29.82 |
| CDY30505 | Canola | nucleus | 24.41 | 29.62 |
| CDX77160 | Canola | nucleus | 24.41 | 29.43 |
| Bra034392.1-P | Field mustard | nucleus | 24.41 | 29.43 |
| Zm00001d024522_P001 | Maize | nucleus | 16.01 | 23.64 |
| Zm00001d025141_P003 | Maize | nucleus | 14.44 | 20.99 |
| Zm00001d004095_P001 | Maize | nucleus | 16.01 | 19.87 |
| Zm00001d036382_P001 | Maize | nucleus | 12.6 | 15.19 |
| Zm00001d027546_P001 | Maize | nucleus | 14.17 | 14.67 |
| Zm00001d042263_P001 | Maize | nucleus | 14.44 | 13.16 |
| Zm00001d014814_P002 | Maize | plastid | 12.6 | 13.08 |
| Zm00001d049294_P001 | Maize | nucleus | 16.27 | 11.97 |
| Zm00001d007382_P001 | Maize | nucleus | 16.01 | 11.75 |
| Zm00001d053895_P001 | Maize | nucleus | 16.8 | 10.24 |
Protein Annotations
| MapMan:15.5.32 | UniProt:A0A1D6J5I9 | ProteinID:AQK43202.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF17 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000844AF0A | EnsemblPlantsGene:Zm00001d025205 | EnsemblPlants:Zm00001d025205_P001 | EnsemblPlants:Zm00001d025205_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
bHLH-transcription factor 100Putative HLH DNA-binding domain superfamily protein
Coordinates
chr10:+:109117980..109119599
Molecular Weight (calculated)
41235.3 Da
IEP (calculated)
5.582
GRAVY (calculated)
-0.526
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMEEQLLHL EHFMPSSPGF FDVGSGHDPA HFPNGGLFVE QVGATDDGGW VEELMQLGEE LFGGPGDGGI MGDADDHYQQ WQCDDDVDGG SPDGGPPPSV
101: SLDGDDASPG EQGAGELASE PHREDGDDVS GATRKRRDRS KTIVSERKRR VRMKEKLYEL RSLVPNITKV RLAPVWTSEF GRLFAGELGH SIHVVPLHAC
201: ARHVQMDKAS IIADAVVYVK NLQAHARKLK DEVATLEARP RSPTRQDQPQ LQHGRSAGPG RRRQQQQQVE RRDAGSAGAG ARVTHVGAAQ VGDGRFFVTV
301: ECERRDGVAA PLCAAAESLL CFRVESSSIG RSGPDRVVST LTLKVSEQVG DAAIGEASVK HWMMAALIRE GFRPEATVQI S
101: SLDGDDASPG EQGAGELASE PHREDGDDVS GATRKRRDRS KTIVSERKRR VRMKEKLYEL RSLVPNITKV RLAPVWTSEF GRLFAGELGH SIHVVPLHAC
201: ARHVQMDKAS IIADAVVYVK NLQAHARKLK DEVATLEARP RSPTRQDQPQ LQHGRSAGPG RRRQQQQQVE RRDAGSAGAG ARVTHVGAAQ VGDGRFFVTV
301: ECERRDGVAA PLCAAAESLL CFRVESSSIG RSGPDRVVST LTLKVSEQVG DAAIGEASVK HWMMAALIRE GFRPEATVQI S
001: MEGRVNALSN INDLELHNFL VDPNFDQFIN LIRGDHQTID ENPVLDFDLG PLQNSPCFID ENQFIPTPVD DLFDELPDLD SNVAESFRSF DGDSVRAGGE
101: EDEEDYNDGD DSSATTTNND GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA KKLKSDIAGL EASLNSTGGY
201: QEHAPDAQKT QPFRGINPPA SKKIIQMDVI QVEEKGFYVR LVCNKGEGVA PSLYKSLESL TSFQVQNSNL SSPSPDTYLL TYTLDGTCFE QSLNLPNLKL
301: WITGSLLNQG FEFIKSFT
101: EDEEDYNDGD DSSATTTNND GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA KKLKSDIAGL EASLNSTGGY
201: QEHAPDAQKT QPFRGINPPA SKKIIQMDVI QVEEKGFYVR LVCNKGEGVA PSLYKSLESL TSFQVQNSNL SSPSPDTYLL TYTLDGTCFE QSLNLPNLKL
301: WITGSLLNQG FEFIKSFT
Arabidopsis Description
FITTranscription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Source:UniProtKB/Swiss-Prot;Acc:Q0V7X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.