Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G28160.1 | KXG26070 | AT2G28160.1 | 18268542 |
| AT2G28160.1 | KXG34133 | AT3G56970.1 | 18268542 |
| AT2G28160.1 | KXG34133 | AT3G56980.1 | 18268542 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004007_P001 | Maize | nucleus | 79.78 | 81.56 |
| Zm00001d025205_P001 | Maize | nucleus | 82.24 | 79.0 |
| TraesCS2D01G280100.1 | Wheat | nucleus | 58.47 | 63.13 |
| TraesCS2A01G281200.1 | Wheat | nucleus | 58.2 | 63.02 |
| TraesCS2B01G298600.1 | Wheat | nucleus | 58.74 | 62.68 |
| Os04t0381700-00 | Rice | nucleus | 56.28 | 58.52 |
| HORVU2Hr1G068960.2 | Barley | nucleus | 48.91 | 58.5 |
| GSMUA_Achr6P27600_001 | Banana | nucleus | 37.7 | 45.39 |
| KRH22827 | Soybean | nucleus | 29.78 | 33.75 |
| Solyc06g051550.2.1 | Tomato | cytosol | 27.05 | 32.57 |
| AT2G28160.1 | Thale cress | nucleus | 28.14 | 32.39 |
| PGSC0003DMT400048941 | Potato | nucleus | 27.6 | 32.37 |
| Bra000495.1-P | Field mustard | nucleus | 27.05 | 32.14 |
| CDY31199 | Canola | nucleus | 27.32 | 31.95 |
| KRH26533 | Soybean | nucleus | 27.87 | 31.68 |
| KRH30560 | Soybean | nucleus | 26.78 | 31.41 |
| Bra011972.1-P | Field mustard | nucleus | 27.05 | 31.33 |
| CDY04543 | Canola | nucleus | 27.05 | 31.33 |
| CDX71377 | Canola | nucleus | 27.05 | 31.33 |
| CDX83286 | Canola | nucleus | 26.78 | 31.31 |
| VIT_06s0061g00720.t01 | Wine grape | nucleus | 26.78 | 31.21 |
| CDY30505 | Canola | nucleus | 26.23 | 30.57 |
| Bra034392.1-P | Field mustard | nucleus | 26.23 | 30.38 |
| CDX77160 | Canola | nucleus | 26.23 | 30.38 |
| KRH25108 | Soybean | nucleus | 23.22 | 29.82 |
| EES14602 | Sorghum | nucleus | 16.94 | 21.53 |
| EES05013 | Sorghum | nucleus | 15.57 | 20.21 |
| KXG27392 | Sorghum | cytosol | 8.2 | 18.75 |
| EER92904 | Sorghum | nucleus | 15.03 | 14.75 |
| EES04142 | Sorghum | nucleus | 14.21 | 13.83 |
| EES08566 | Sorghum | nucleus | 18.31 | 12.88 |
| EER88977 | Sorghum | plastid | 13.11 | 12.57 |
| KXG29315 | Sorghum | nucleus | 17.76 | 11.38 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.5 | Gene3D:4.10.280.10 | UniProt:A0A1B6PK80 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlants:KXG26070 | ProteinID:KXG26070 | ProteinID:KXG26070.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR31945 |
| PANTHER:PTHR31945:SF17 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3006G047200 | SUPFAM:SSF47459 | UniParc:UPI00081AE3A6 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:32754421..32756223
Molecular Weight (calculated)
39144.6 Da
IEP (calculated)
4.727
GRAVY (calculated)
-0.575
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMEHQLQQL LHLEHFMPSS PGFFAVDSGQ DPAHFPNGGL FVEPHVGATD DDGGWVEDLM QLGEELFGGQ ADGDDDVNGT GAGGMLGDDD HYQQQWQCDD
101: DDDGGGSPDG PPPSISLDDD ASPPSGEQGA GEAGELASEP HPLREDGDDV SAGATRKRRD RSKTIVSERK RRVRMKEKLY ELRSLVPNIT KMDKASIIAD
201: AVVYVKNLQA HARNLKEEVA ALEARPMSPA SRQEQPQPQH GRRAGAAGRR QQQQHAGSSV GSGARVMHVG AAQVGEGRFF VTVECERRDG VAAPLCAAAE
301: SLACFRVESS SIGRSGPDRV VSTLTLKVVS QRVGGDAAIG EASVKLWMMA ALLKEGFRPE ATVQMS
101: DDDGGGSPDG PPPSISLDDD ASPPSGEQGA GEAGELASEP HPLREDGDDV SAGATRKRRD RSKTIVSERK RRVRMKEKLY ELRSLVPNIT KMDKASIIAD
201: AVVYVKNLQA HARNLKEEVA ALEARPMSPA SRQEQPQPQH GRRAGAAGRR QQQQHAGSSV GSGARVMHVG AAQVGEGRFF VTVECERRDG VAAPLCAAAE
301: SLACFRVESS SIGRSGPDRV VSTLTLKVVS QRVGGDAAIG EASVKLWMMA ALLKEGFRPE ATVQMS
001: MEGRVNALSN INDLELHNFL VDPNFDQFIN LIRGDHQTID ENPVLDFDLG PLQNSPCFID ENQFIPTPVD DLFDELPDLD SNVAESFRSF DGDSVRAGGE
101: EDEEDYNDGD DSSATTTNND GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA KKLKSDIAGL EASLNSTGGY
201: QEHAPDAQKT QPFRGINPPA SKKIIQMDVI QVEEKGFYVR LVCNKGEGVA PSLYKSLESL TSFQVQNSNL SSPSPDTYLL TYTLDGTCFE QSLNLPNLKL
301: WITGSLLNQG FEFIKSFT
101: EDEEDYNDGD DSSATTTNND GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA KKLKSDIAGL EASLNSTGGY
201: QEHAPDAQKT QPFRGINPPA SKKIIQMDVI QVEEKGFYVR LVCNKGEGVA PSLYKSLESL TSFQVQNSNL SSPSPDTYLL TYTLDGTCFE QSLNLPNLKL
301: WITGSLLNQG FEFIKSFT
Arabidopsis Description
FITTranscription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Source:UniProtKB/Swiss-Prot;Acc:Q0V7X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.