Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22827 | Soybean | nucleus | 88.2 | 87.93 |
| KRH30560 | Soybean | nucleus | 62.73 | 64.74 |
| KRH25108 | Soybean | nucleus | 55.28 | 62.46 |
| VIT_06s0061g00720.t01 | Wine grape | nucleus | 51.24 | 52.55 |
| AT2G28160.1 | Thale cress | nucleus | 49.38 | 50.0 |
| Bra011972.1-P | Field mustard | nucleus | 49.07 | 50.0 |
| CDX71377 | Canola | nucleus | 49.07 | 50.0 |
| CDY04543 | Canola | nucleus | 49.07 | 50.0 |
| Bra034392.1-P | Field mustard | nucleus | 48.45 | 49.37 |
| CDX77160 | Canola | nucleus | 48.45 | 49.37 |
| CDY30505 | Canola | nucleus | 48.14 | 49.36 |
| Bra000495.1-P | Field mustard | nucleus | 46.89 | 49.03 |
| CDX83286 | Canola | nucleus | 47.52 | 48.88 |
| CDY31199 | Canola | nucleus | 47.52 | 48.88 |
| PGSC0003DMT400048941 | Potato | nucleus | 43.48 | 44.87 |
| Solyc06g051550.2.1 | Tomato | cytosol | 41.3 | 43.75 |
| GSMUA_Achr6P27600_001 | Banana | nucleus | 30.43 | 32.24 |
| HORVU2Hr1G068960.2 | Barley | nucleus | 29.5 | 31.05 |
| TraesCS2A01G281200.1 | Wheat | nucleus | 31.68 | 30.18 |
| TraesCS2D01G280100.1 | Wheat | nucleus | 31.37 | 29.79 |
| TraesCS2B01G298600.1 | Wheat | nucleus | 31.68 | 29.74 |
| KRH41065 | Soybean | nucleus | 12.42 | 28.78 |
| Os04t0381700-00 | Rice | nucleus | 30.75 | 28.12 |
| Zm00001d004007_P001 | Maize | nucleus | 31.06 | 27.93 |
| KXG26070 | Sorghum | nucleus | 31.68 | 27.87 |
| KRH73107 | Soybean | mitochondrion, nucleus | 13.04 | 25.77 |
| Zm00001d025205_P001 | Maize | nucleus | 30.43 | 25.72 |
| KRH37338 | Soybean | nucleus | 18.01 | 23.77 |
| KRH12334 | Soybean | nucleus | 17.7 | 23.46 |
| KRH19109 | Soybean | nucleus | 16.46 | 22.94 |
| KRH45479 | Soybean | nucleus | 20.19 | 20.31 |
| KRH74438 | Soybean | nucleus | 20.5 | 19.76 |
| KRH39520 | Soybean | nucleus | 19.57 | 18.92 |
| KRH62159 | Soybean | nucleus | 18.94 | 18.48 |
| KRH52870 | Soybean | nucleus | 18.32 | 17.82 |
| KRH16909 | Soybean | nucleus | 18.32 | 17.56 |
| KRH72519 | Soybean | nucleus | 18.01 | 17.42 |
| KRG99605 | Soybean | cytosol | 8.39 | 17.09 |
| KRH02772 | Soybean | nucleus | 18.01 | 17.06 |
| KRH16156 | Soybean | nucleus | 14.29 | 16.91 |
| KRG94685 | Soybean | nucleus | 21.74 | 16.43 |
| KRH54112 | Soybean | nucleus | 22.98 | 16.02 |
| KRH06841 | Soybean | nucleus | 22.36 | 16.0 |
| KRH63854 | Soybean | nucleus | 22.67 | 15.7 |
| KRH08406 | Soybean | nucleus | 21.43 | 15.54 |
| KRH59747 | Soybean | nucleus | 22.36 | 14.91 |
| KRH45665 | Soybean | nucleus | 19.88 | 12.9 |
| KRH36073 | Soybean | nucleus | 20.5 | 11.56 |
| KRG90676 | Soybean | extracellular, vacuole | 19.88 | 11.09 |
Protein Annotations
| EntrezGene:100787584 | MapMan:15.5.32 | MapMan:25.4.1.5 | Gene3D:4.10.280.10 | EMBL:ACUP02007718 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_12G178500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1LTN4 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH26533 | ProteinID:KRH26533 | ProteinID:KRH26533.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF17 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233D5C9 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:33840402..33842306
Molecular Weight (calculated)
36149.6 Da
IEP (calculated)
4.862
GRAVY (calculated)
-0.436
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTMDVHQDT LTYMNDFELY DFVADPNFDQ FINLFRGENE DANCDHFGSD LINDCFANNQ QQLLSCPANP FDQNNNNNAV NVYDPSSTFS SFSYYDRELK
101: GEGGEELDEE HSSGTMTTTT NNAVGKPKVK TDMSKTLISE RRRRGRMKEK LYALRSLVPN ITKMDKASII GDAASYVHDL QARARKLKAE VAGLEASLLV
201: SENYQGSINY PKNVQVARNI GHPICKKIMQ MEMFQVEERG YYAKIMCNKV QGLAASLYRA LESLAGFNVQ NSNLATVDDS FLLTFTLNVK GTEPEINLPN
301: LKLWVTAALL NQGFEFVASF PA
101: GEGGEELDEE HSSGTMTTTT NNAVGKPKVK TDMSKTLISE RRRRGRMKEK LYALRSLVPN ITKMDKASII GDAASYVHDL QARARKLKAE VAGLEASLLV
201: SENYQGSINY PKNVQVARNI GHPICKKIMQ MEMFQVEERG YYAKIMCNKV QGLAASLYRA LESLAGFNVQ NSNLATVDDS FLLTFTLNVK GTEPEINLPN
301: LKLWVTAALL NQGFEFVASF PA
001: MEGRVNALSN INDLELHNFL VDPNFDQFIN LIRGDHQTID ENPVLDFDLG PLQNSPCFID ENQFIPTPVD DLFDELPDLD SNVAESFRSF DGDSVRAGGE
101: EDEEDYNDGD DSSATTTNND GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA KKLKSDIAGL EASLNSTGGY
201: QEHAPDAQKT QPFRGINPPA SKKIIQMDVI QVEEKGFYVR LVCNKGEGVA PSLYKSLESL TSFQVQNSNL SSPSPDTYLL TYTLDGTCFE QSLNLPNLKL
301: WITGSLLNQG FEFIKSFT
101: EDEEDYNDGD DSSATTTNND GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA KKLKSDIAGL EASLNSTGGY
201: QEHAPDAQKT QPFRGINPPA SKKIIQMDVI QVEEKGFYVR LVCNKGEGVA PSLYKSLESL TSFQVQNSNL SSPSPDTYLL TYTLDGTCFE QSLNLPNLKL
301: WITGSLLNQG FEFIKSFT
Arabidopsis Description
FITTranscription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Source:UniProtKB/Swiss-Prot;Acc:Q0V7X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.