Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99605 | Soybean | cytosol | 45.15 | 94.3 |
| KRH52870 | Soybean | nucleus | 93.33 | 93.05 |
| KRH16156 | Soybean | nucleus | 76.36 | 92.65 |
| KRH16909 | Soybean | nucleus | 79.09 | 77.68 |
| KRH72519 | Soybean | nucleus | 77.27 | 76.58 |
| KRH73107 | Soybean | mitochondrion, nucleus | 35.45 | 71.78 |
| GSMUA_Achr1P26300_001 | Banana | nucleus | 48.79 | 67.36 |
| VIT_18s0001g08040.t01 | Wine grape | nucleus | 66.67 | 65.87 |
| GSMUA_Achr7P03930_001 | Banana | nucleus | 47.27 | 65.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.15 | 62.87 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 52.42 | 60.49 |
| KRH39520 | Soybean | nucleus | 58.18 | 57.66 |
| KRH74438 | Soybean | nucleus | 57.58 | 56.89 |
| PGSC0003DMT400016360 | Potato | nucleus | 57.27 | 55.92 |
| Solyc02g063430.2.1 | Tomato | nucleus | 51.21 | 52.65 |
| KRH45479 | Soybean | nucleus | 49.7 | 51.25 |
| TraesCS4D01G328700.1 | Wheat | cytosol | 22.42 | 50.68 |
| Solyc12g088130.1.1 | Tomato | nucleus | 50.61 | 49.7 |
| Solyc02g091690.2.1 | Tomato | nucleus | 49.09 | 49.24 |
| AT5G65640.1 | Thale cress | nucleus | 51.52 | 48.43 |
| AT5G10570.1 | Thale cress | nucleus | 45.15 | 47.3 |
| Bra024404.1-P | Field mustard | nucleus | 50.61 | 46.52 |
| CDY08769 | Canola | nucleus | 50.61 | 46.52 |
| Bra031852.1-P | Field mustard | nucleus | 50.3 | 46.37 |
| CDY37835 | Canola | nucleus | 50.3 | 46.37 |
| CDY69978 | Canola | nucleus | 50.0 | 46.09 |
| CDX97027 | Canola | nucleus | 40.61 | 44.97 |
| Bra009022.1-P | Field mustard | nucleus | 40.91 | 44.55 |
| TraesCS4B01G331900.1 | Wheat | nucleus | 40.91 | 44.26 |
| CDX69821 | Canola | nucleus | 40.61 | 44.22 |
| Os03t0135700-01 | Rice | nucleus | 46.97 | 43.79 |
| EER92904 | Sorghum | nucleus | 47.27 | 41.82 |
| TraesCS4D01G329100.1 | Wheat | nucleus | 43.94 | 41.43 |
| TraesCS5A01G503300.1 | Wheat | nucleus | 44.24 | 41.36 |
| TraesCS4D01G328900.1 | Wheat | nucleus | 43.33 | 41.09 |
| TraesCS4D01G329000.2 | Wheat | nucleus | 43.94 | 41.08 |
| TraesCS3A01G057900.1 | Wheat | nucleus | 40.61 | 40.98 |
| TraesCS4B01G332000.1 | Wheat | nucleus | 43.03 | 40.92 |
| TraesCS4D01G328800.1 | Wheat | nucleus | 43.64 | 40.79 |
| Zm00001d027546_P001 | Maize | nucleus | 45.45 | 40.76 |
| TraesCSU01G069400.1 | Wheat | nucleus | 43.33 | 40.62 |
| TraesCS5A01G503500.1 | Wheat | nucleus | 43.03 | 40.34 |
| TraesCS3D01G058100.1 | Wheat | nucleus | 36.06 | 40.2 |
| HORVU4Hr1G080890.1 | Barley | nucleus | 42.73 | 39.72 |
| TraesCS3A01G058000.1 | Wheat | nucleus | 35.76 | 39.33 |
| TraesCS3B01G070400.1 | Wheat | nucleus | 35.76 | 38.69 |
| TraesCSU01G069300.1 | Wheat | nucleus | 39.39 | 36.93 |
| TraesCS5A01G503400.1 | Wheat | nucleus | 40.0 | 36.57 |
| KRH41065 | Soybean | nucleus | 15.15 | 35.97 |
| KRH12334 | Soybean | nucleus | 18.48 | 25.1 |
| KRH37338 | Soybean | nucleus | 17.88 | 24.18 |
| KRH19109 | Soybean | nucleus | 16.36 | 23.38 |
| KRH54112 | Soybean | nucleus | 32.12 | 22.94 |
| KRH63854 | Soybean | nucleus | 31.21 | 22.15 |
| KRG94685 | Soybean | nucleus | 28.48 | 22.07 |
| KRH06841 | Soybean | nucleus | 28.79 | 21.11 |
| KRH08406 | Soybean | nucleus | 26.67 | 19.82 |
| KRH25108 | Soybean | nucleus | 16.97 | 19.65 |
| KRH59747 | Soybean | nucleus | 28.48 | 19.46 |
| KRH26533 | Soybean | nucleus | 18.48 | 18.94 |
| KRH30560 | Soybean | nucleus | 17.58 | 18.59 |
| KRH22827 | Soybean | nucleus | 17.88 | 18.27 |
| KRH02772 | Soybean | nucleus | 17.27 | 16.76 |
| KRH36073 | Soybean | nucleus | 23.94 | 13.84 |
| KRG90676 | Soybean | extracellular, vacuole | 23.64 | 13.52 |
| KRH45665 | Soybean | nucleus | 18.18 | 12.1 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02002226 | ncoils:Coil | EnsemblPlantsGene:GLYMA_04G090100 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1JV18 | InterPro:IPR011598 |
| InterPro:IPR036638 | EnsemblPlants:KRH62159 | ProteinID:KRH62159 | ProteinID:KRH62159.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR31945 | PANTHER:PTHR31945:SF15 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00023397D9 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:7925049..7927074
Molecular Weight (calculated)
37776.8 Da
IEP (calculated)
4.279
GRAVY (calculated)
-0.592
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFYDQDFLE ELMTLRRETW DTNPRTEENQ FFDGGSFDCF DQNSLPYLPN SSCGQEVPQT YNNDYPFSEI YGCLLDESSP QIMDSFYSTL DTPLNTPPFL
101: GQEDYPILSM MEEEEQGLLG EELKNLELQT TCKMEPTQSS EMPVFNMGTG LERKNRSKKL QGQPSKNLMA ERRRRKRLND RLSMLRAIVP KISKMDRTSI
201: LGDTIDYMKE LLEKINNLQQ EVEVDSNMAG IFKDVKPNEI LVRNSPKFEV ERSVDTRVEI CCAGKPGLIL STVNTLEALG LEIQQCVISC FNDFTMQASC
301: SEESEQRTML SSEDIKQALF RSAGYGGRCL
101: GQEDYPILSM MEEEEQGLLG EELKNLELQT TCKMEPTQSS EMPVFNMGTG LERKNRSKKL QGQPSKNLMA ERRRRKRLND RLSMLRAIVP KISKMDRTSI
201: LGDTIDYMKE LLEKINNLQQ EVEVDSNMAG IFKDVKPNEI LVRNSPKFEV ERSVDTRVEI CCAGKPGLIL STVNTLEALG LEIQQCVISC FNDFTMQASC
301: SEESEQRTML SSEDIKQALF RSAGYGGRCL
001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
Arabidopsis Description
BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.