Factsheet for Bra009022.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69821	Canola	nucleus	97.69	97.69
CDX97027	Canola	nucleus	93.4	94.97
AT5G10570.1	Thale cress	nucleus	72.28	69.52
KRH73107	Soybean	mitochondrion, nucleus	33.33	61.96
Bra024404.1-P	Field mustard	nucleus	67.0	56.55
Bra031852.1-P	Field mustard	nucleus	64.69	54.75
GSMUA_Achr7P03930_001	Banana	nucleus	40.59	51.9
GSMUA_AchrUn_...	Banana	nucleus	40.59	51.9
GSMUA_Achr1P26300_001	Banana	nucleus	40.92	51.88
KRG99605	Soybean	cytosol	26.73	51.27
TraesCS4D01G328700.1	Wheat	cytosol	21.45	44.52
GSMUA_Achr8P34120_001	Banana	nucleus	41.91	44.41
VIT_00s1312g00010.t01	Wine grape	nucleus	48.18	44.11
PGSC0003DMT400026937	Potato	nucleus	46.86	43.56
Solyc02g063430.2.1	Tomato	nucleus	45.54	42.99
KRH39520	Soybean	nucleus	46.86	42.64
KRH74438	Soybean	nucleus	46.86	42.52
VIT_18s0001g08040.t01	Wine grape	nucleus	46.2	41.92
Solyc02g091690.2.1	Tomato	nucleus	44.88	41.34
VIT_17s0000g03550.t01	Wine grape	nucleus	43.89	41.3
KRH52870	Soybean	nucleus	44.88	41.09
KRH62159	Soybean	nucleus	44.55	40.91
KRH45479	Soybean	nucleus	42.57	40.31
PGSC0003DMT400078675	Potato	nucleus	44.55	40.3
KRH16909	Soybean	nucleus	43.89	39.58
KRH16156	Soybean	nucleus	35.31	39.34
KRH72519	Soybean	nucleus	42.9	39.04
TraesCS4B01G331900.1	Wheat	nucleus	35.97	35.74
Os03t0135700-01	Rice	nucleus	38.94	33.33
TraesCS3A01G057900.1	Wheat	nucleus	35.97	33.33
Zm00001d027546_P001	Maize	nucleus	39.93	32.88
EER92904	Sorghum	nucleus	39.93	32.44
TraesCS3D01G058100.1	Wheat	nucleus	31.02	31.76
TraesCS3A01G058000.1	Wheat	nucleus	31.35	31.67
TraesCS4D01G328900.1	Wheat	nucleus	36.3	31.61
TraesCS3B01G070400.1	Wheat	nucleus	31.68	31.48
TraesCS5A01G503300.1	Wheat	nucleus	36.3	31.16
TraesCS4D01G329100.1	Wheat	nucleus	35.97	31.14
TraesCS5A01G503500.1	Wheat	nucleus	35.97	30.97
TraesCS4D01G328800.1	Wheat	nucleus	35.97	30.88
TraesCSU01G069400.1	Wheat	nucleus	35.64	30.68
TraesCS4D01G329000.2	Wheat	nucleus	35.64	30.59
TraesCS4B01G332000.1	Wheat	nucleus	34.98	30.55
HORVU4Hr1G080890.1	Barley	nucleus	35.64	30.42
TraesCS5A01G503400.1	Wheat	nucleus	34.65	29.09
TraesCSU01G069300.1	Wheat	nucleus	30.69	26.42
Bra024115.1-P	Field mustard	nucleus	18.15	22.54
Bra011152.1-P	Field mustard	nucleus	18.15	22.18
Bra034246.1-P	Field mustard	nucleus	29.04	21.05
Bra019794.1-P	Field mustard	nucleus	29.04	20.71
Bra032947.1-P	Field mustard	nucleus	28.71	19.68
Bra016749.1-P	Field mustard	nucleus	27.72	19.4
Bra006831.1-P	Field mustard	nucleus	15.51	19.11
Bra002756.1-P	Field mustard	nucleus	15.51	19.11
Bra020462.1-P	Field mustard	nucleus	15.18	18.7
Bra025226.1-P	Field mustard	nucleus	30.36	18.51
Bra034392.1-P	Field mustard	nucleus	18.48	17.72
Bra011972.1-P	Field mustard	nucleus	17.82	17.09
Bra000495.1-P	Field mustard	nucleus	17.16	16.88
Bra031723.1-P	Field mustard	cytosol	16.83	13.21
Bra019914.1-P	Field mustard	cytosol	17.49	12.71
Bra002004.1-P	Field mustard	nucleus	23.43	12.52
Bra013041.1-P	Field mustard	nucleus	22.44	11.97

Protein Annotations

EnsemblPlants:Bra009022.1	EnsemblPlants:Bra009022.1-P	EnsemblPlantsGene:Bra009022	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR31945	PANTHER:PTHR31945:SF6	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI00025446BD	UniProt:M4CXS5	MapMan:15.5.32	:	:	:

Description

AT5G10570 (E=2e-085) | basic helix-loop-helix (bHLH) family protein

Coordinates

chrA10:-:14894343..14895809

Molecular Weight (calculated)

34084.0 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.673

Length

303 amino acids

Sequence
(BLAST)

001: MDMEWTQISK QESNNHDDNY GDFFPSGRNL EYLCFNNPLQ EDVNNIDHTF SSLMDLISQP PPLLHQPPQP SSSPTPFFSS SFDYPLPETL QDVTESPYYP
101: PLGLSASQEG NNNDNSSPLV EESKSFMSTG ETNKKMRNKK VVGQPSKNLM AERRRRKRLN DRLSMLRSIM DRTSILGDAI EYMKELLDKI NKLQELGSNS
201: DLKDSLTTNQ SMVRNSPKFE VDRREDNTHI DICCSTQPGL LLSTVGTLEI NLGLEIQQCV ISCFSDFSLQ ATCSEVAGQR ECITSEDIKQ ALLKNAGYGG
301: RCS

Best Arabidopsis Sequence Match ( AT5G10570.1 )
(BLAST)

001: METELTQLRK QESNNLNGVN GGFMAIDQFV PNDWNFDYLC FNNLLQEDDN IDHPSSSSLM NLISQPPPLL HQPPQPSSPL YDSPPLSSAF DYPFLEDIIH
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL

Arabidopsis Description

BHLH61Transcription factor bHLH61 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.