Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P03930_001 | Banana | nucleus | 84.94 | 85.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 80.33 | 81.01 |
| KRH73107 | Soybean | mitochondrion, nucleus | 50.63 | 74.23 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 88.28 | 73.78 |
| KRG99605 | Soybean | cytosol | 40.59 | 61.39 |
| VIT_18s0001g08040.t01 | Wine grape | nucleus | 73.22 | 52.4 |
| VIT_00s1312g00010.t01 | Wine grape | nucleus | 71.55 | 51.66 |
| PGSC0003DMT400016360 | Potato | nucleus | 69.46 | 49.11 |
| KRH74438 | Soybean | nucleus | 68.62 | 49.1 |
| KRH39520 | Soybean | nucleus | 68.2 | 48.95 |
| KRH62159 | Soybean | nucleus | 67.36 | 48.79 |
| KRH16909 | Soybean | nucleus | 67.78 | 48.21 |
| KRH52870 | Soybean | nucleus | 66.53 | 48.04 |
| KRH72519 | Soybean | nucleus | 66.11 | 47.45 |
| KRH45479 | Soybean | nucleus | 63.18 | 47.19 |
| KRH16156 | Soybean | nucleus | 53.14 | 46.69 |
| VIT_17s0000g03550.t01 | Wine grape | nucleus | 61.09 | 45.34 |
| Solyc02g063430.2.1 | Tomato | nucleus | 59.83 | 44.55 |
| PGSC0003DMT400026937 | Potato | nucleus | 60.67 | 44.48 |
| Solyc12g088130.1.1 | Tomato | nucleus | 61.92 | 44.05 |
| Solyc02g091690.2.1 | Tomato | nucleus | 60.25 | 43.77 |
| PGSC0003DMT400078675 | Potato | nucleus | 60.25 | 42.99 |
| AT5G10570.1 | Thale cress | nucleus | 54.81 | 41.59 |
| AT5G65640.1 | Thale cress | nucleus | 60.25 | 41.03 |
| Bra009022.1-P | Field mustard | nucleus | 51.88 | 40.92 |
| GSMUA_Achr6P08070_001 | Banana | nucleus | 37.24 | 40.83 |
| CDY69978 | Canola | nucleus | 60.67 | 40.5 |
| Bra024404.1-P | Field mustard | nucleus | 60.67 | 40.39 |
| CDY08769 | Canola | nucleus | 60.67 | 40.39 |
| CDX97027 | Canola | nucleus | 50.21 | 40.27 |
| Bra031852.1-P | Field mustard | nucleus | 59.83 | 39.94 |
| CDY37835 | Canola | nucleus | 59.83 | 39.94 |
| CDX69821 | Canola | nucleus | 50.63 | 39.93 |
| PGSC0003DMT400005209 | Potato | nucleus | 38.08 | 35.27 |
| GSMUA_Achr10P... | Banana | nucleus | 16.74 | 29.2 |
| GSMUA_Achr6P30900_001 | Banana | nucleus | 17.57 | 20.0 |
| GSMUA_Achr10P... | Banana | nucleus | 42.68 | 19.77 |
| GSMUA_Achr10P... | Banana | nucleus | 41.42 | 19.45 |
| GSMUA_Achr7P16000_001 | Banana | nucleus | 20.92 | 19.23 |
| GSMUA_Achr1P07450_001 | Banana | nucleus, plastid | 23.43 | 19.11 |
| GSMUA_Achr11P... | Banana | nucleus | 41.84 | 19.01 |
| GSMUA_Achr3P00640_001 | Banana | nucleus | 23.43 | 18.79 |
| GSMUA_Achr4P12700_001 | Banana | nucleus | 23.01 | 18.64 |
| GSMUA_Achr6P27600_001 | Banana | nucleus | 20.5 | 16.12 |
| GSMUA_Achr1P07330_001 | Banana | nucleus | 23.85 | 13.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.99 | 12.99 |
| GSMUA_Achr6P08060_001 | Banana | nucleus | 18.41 | 11.61 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P26300_001 | EnsemblPlants:GSMUA_Achr1T26300_001 | EnsemblPlantsGene:GSMUA_Achr1G26300_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR31945 | PANTHER:PTHR31945:SF15 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000294D3D1 | UniProt:M0S387 | MapMan:15.5.32 | : | : |
Description
BHLH transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G26300_001]
Coordinates
chr1:-:21673318..21674479
Molecular Weight (calculated)
27077.7 Da
IEP (calculated)
5.094
GRAVY (calculated)
-0.384
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MELDEHGFLE ELMSLRRDAW DSFPAAMGEF FSCDGSLDCF QQTPGLVPPS FTAFDAGRKK KKKLEGMPSK NLMAERRRRK RLNDRLSMLR SVVPKISKMD
101: RTSILGDTID YMKELLERIK HLQEEIEVGP EQANLLSIIK ELNSDEVLVR NSPKFDVERR ENDTRIEICC AAKPGLLLST VNTLEALGME IQQCVISCFN
201: DFGMQASCSE LDMDPRTVVS AEDIKQALFR NAGYGGRCL
101: RTSILGDTID YMKELLERIK HLQEEIEVGP EQANLLSIIK ELNSDEVLVR NSPKFDVERR ENDTRIEICC AAKPGLLLST VNTLEALGME IQQCVISCFN
201: DFGMQASCSE LDMDPRTVVS AEDIKQALFR NAGYGGRCL
001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
Arabidopsis Description
BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.