Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g063430.2.1 | Tomato | nucleus | 92.64 | 94.08 |
| PGSC0003DMT400078675 | Potato | nucleus | 62.88 | 61.19 |
| GSMUA_Achr1P26300_001 | Banana | nucleus | 44.48 | 60.67 |
| GSMUA_Achr7P03930_001 | Banana | nucleus | 43.87 | 60.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.25 | 59.49 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 47.85 | 54.55 |
| CDX97027 | Canola | nucleus | 42.94 | 46.98 |
| Bra009022.1-P | Field mustard | nucleus | 43.56 | 46.86 |
| AT5G10570.1 | Thale cress | nucleus | 45.09 | 46.67 |
| CDX69821 | Canola | nucleus | 43.25 | 46.53 |
| AT5G65640.1 | Thale cress | nucleus | 49.69 | 46.15 |
| PGSC0003DMT400016360 | Potato | nucleus | 47.24 | 45.56 |
| CDY08769 | Canola | nucleus | 49.69 | 45.13 |
| Bra024404.1-P | Field mustard | nucleus | 49.69 | 45.13 |
| CDY69978 | Canola | nucleus | 49.08 | 44.69 |
| Bra031852.1-P | Field mustard | nucleus | 48.77 | 44.41 |
| CDY37835 | Canola | nucleus | 48.47 | 44.13 |
| TraesCS4D01G328700.1 | Wheat | cytosol | 19.63 | 43.84 |
| Os03t0135700-01 | Rice | nucleus | 42.33 | 38.98 |
| TraesCS4B01G331900.1 | Wheat | nucleus | 35.89 | 38.36 |
| Zm00001d027546_P001 | Maize | nucleus | 42.94 | 38.04 |
| EER92904 | Sorghum | nucleus | 43.25 | 37.8 |
| TraesCS3D01G058100.1 | Wheat | nucleus | 33.44 | 36.82 |
| TraesCS3A01G057900.1 | Wheat | nucleus | 36.81 | 36.7 |
| PGSC0003DMT400005209 | Potato | nucleus | 28.83 | 36.43 |
| TraesCS4D01G329100.1 | Wheat | nucleus | 38.04 | 35.43 |
| TraesCS5A01G503300.1 | Wheat | nucleus | 38.34 | 35.41 |
| TraesCS4D01G328900.1 | Wheat | nucleus | 37.73 | 35.34 |
| TraesCSU01G069400.1 | Wheat | nucleus | 37.42 | 34.66 |
| TraesCS5A01G503500.1 | Wheat | nucleus | 37.42 | 34.66 |
| TraesCS4D01G329000.2 | Wheat | nucleus | 37.42 | 34.56 |
| TraesCS4D01G328800.1 | Wheat | nucleus | 37.42 | 34.56 |
| HORVU4Hr1G080890.1 | Barley | nucleus | 37.42 | 34.37 |
| TraesCS3A01G058000.1 | Wheat | nucleus | 31.6 | 34.33 |
| TraesCS4B01G332000.1 | Wheat | nucleus | 36.5 | 34.29 |
| TraesCS3B01G070400.1 | Wheat | nucleus | 31.9 | 34.1 |
| TraesCS5A01G503400.1 | Wheat | nucleus | 34.05 | 30.75 |
| TraesCSU01G069300.1 | Wheat | nucleus | 32.82 | 30.4 |
| PGSC0003DMT400010463 | Potato | nucleus | 16.56 | 21.43 |
| PGSC0003DMT400074075 | Potato | nucleus | 31.6 | 19.43 |
| PGSC0003DMT400036951 | Potato | nucleus | 31.6 | 18.69 |
| PGSC0003DMT400044959 | Potato | nucleus | 12.88 | 18.18 |
| PGSC0003DMT400048941 | Potato | nucleus | 16.87 | 17.63 |
| PGSC0003DMT400021165 | Potato | nucleus | 19.02 | 14.25 |
Protein Annotations
| EntrezGene:102596640 | MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M1ANW7 | PFAM:PF00010 |
| EnsemblPlantsGene:PGSC0003DMG400010388 | PGSC:PGSC0003DMG400010388 | EnsemblPlants:PGSC0003DMT400026937 | PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF15 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000294C640 | RefSeq:XP_006346887.1 | InterPro:bHLH_dom | SEG:seg |
Description
BHLH transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400010388]
Coordinates
chr2:-:22379298..22381971
Molecular Weight (calculated)
36825.8 Da
IEP (calculated)
4.994
GRAVY (calculated)
-0.481
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSEHDILE ELLAPRKESW STLNDFFPNG NGWTFESPLP FYQNPEFVAL NSSLLGLISP PISTSQSVFP NFPSPESYQF LDSSFTGPPL LDDYSDRAVV
101: ENHEEFGGII PSDFHGVQEE LNSFGDVKVE EANSRLMGNV GEKKNKIRKV EGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI LGDAIDYMKE
201: LLEKIHTLRE DDNVKDEIKD IKFVGNFKEL KPNEALVKKP PKFEVERRNE DTRIEICCSA KPGLLLSTVS TLEALGLDVQ QCVISCFSDF SLQASCSEAR
301: EHRTILSGED VKQTLFKTAG FGGRCL
101: ENHEEFGGII PSDFHGVQEE LNSFGDVKVE EANSRLMGNV GEKKNKIRKV EGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI LGDAIDYMKE
201: LLEKIHTLRE DDNVKDEIKD IKFVGNFKEL KPNEALVKKP PKFEVERRNE DTRIEICCSA KPGLLLSTVS TLEALGLDVQ QCVISCFSDF SLQASCSEAR
301: EHRTILSGED VKQTLFKTAG FGGRCL
001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
Arabidopsis Description
BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.