Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97027 | Canola | nucleus | 68.57 | 72.48 |
| Bra009022.1-P | Field mustard | nucleus | 69.52 | 72.28 |
| CDX69821 | Canola | nucleus | 69.21 | 71.95 |
| KRH73107 | Soybean | mitochondrion, nucleus | 33.65 | 65.03 |
| AT5G65640.1 | Thale cress | nucleus | 70.79 | 63.53 |
| GSMUA_Achr1P26300_001 | Banana | nucleus | 41.59 | 54.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.95 | 54.43 |
| KRG99605 | Soybean | cytosol | 26.98 | 53.8 |
| GSMUA_Achr7P03930_001 | Banana | nucleus | 40.0 | 53.16 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 42.86 | 47.2 |
| VIT_00s1312g00010.t01 | Wine grape | nucleus | 49.52 | 47.13 |
| KRH39520 | Soybean | nucleus | 49.52 | 46.85 |
| KRH74438 | Soybean | nucleus | 49.21 | 46.41 |
| VIT_18s0001g08040.t01 | Wine grape | nucleus | 48.89 | 46.11 |
| TraesCS4D01G328700.1 | Wheat | cytosol | 21.27 | 45.89 |
| Solyc02g063430.2.1 | Tomato | nucleus | 46.67 | 45.79 |
| KRH52870 | Soybean | nucleus | 47.62 | 45.32 |
| KRH62159 | Soybean | nucleus | 47.3 | 45.15 |
| PGSC0003DMT400026937 | Potato | nucleus | 46.67 | 45.09 |
| KRH45479 | Soybean | nucleus | 45.4 | 44.69 |
| KRH16156 | Soybean | nucleus | 37.78 | 43.75 |
| VIT_17s0000g03550.t01 | Wine grape | nucleus | 43.81 | 42.86 |
| KRH16909 | Soybean | nucleus | 45.4 | 42.56 |
| PGSC0003DMT400078675 | Potato | nucleus | 44.76 | 42.09 |
| KRH72519 | Soybean | nucleus | 44.13 | 41.74 |
| Solyc02g091690.2.1 | Tomato | nucleus | 43.49 | 41.64 |
| Os03t0135700-01 | Rice | nucleus | 41.9 | 37.29 |
| TraesCS4B01G331900.1 | Wheat | nucleus | 35.87 | 37.05 |
| EER92904 | Sorghum | nucleus | 41.9 | 35.39 |
| Zm00001d027546_P001 | Maize | nucleus | 40.32 | 34.51 |
| TraesCS4D01G328900.1 | Wheat | nucleus | 37.14 | 33.62 |
| TraesCS4D01G329100.1 | Wheat | nucleus | 37.14 | 33.43 |
| TraesCS4D01G329000.2 | Wheat | nucleus | 37.46 | 33.43 |
| TraesCS5A01G503300.1 | Wheat | nucleus | 37.14 | 33.14 |
| TraesCS3A01G057900.1 | Wheat | nucleus | 34.29 | 33.03 |
| HORVU4Hr1G080890.1 | Barley | nucleus | 37.14 | 32.96 |
| TraesCS5A01G503500.1 | Wheat | nucleus | 36.83 | 32.95 |
| TraesCS3D01G058100.1 | Wheat | nucleus | 30.79 | 32.77 |
| TraesCSU01G069400.1 | Wheat | nucleus | 36.19 | 32.39 |
| TraesCS4D01G328800.1 | Wheat | nucleus | 35.87 | 32.01 |
| TraesCS4B01G332000.1 | Wheat | nucleus | 35.24 | 31.99 |
| TraesCS3A01G058000.1 | Wheat | nucleus | 29.52 | 31.0 |
| TraesCS3B01G070400.1 | Wheat | nucleus | 29.84 | 30.82 |
| TraesCS5A01G503400.1 | Wheat | nucleus | 34.6 | 30.19 |
| TraesCSU01G069300.1 | Wheat | nucleus | 31.75 | 28.41 |
| AT4G29930.3 | Thale cress | nucleus | 19.37 | 23.19 |
| AT5G57150.4 | Thale cress | nucleus | 18.41 | 21.97 |
| AT1G12860.1 | Thale cress | nucleus | 28.25 | 19.78 |
| AT3G26744.1 | Thale cress | nucleus | 28.89 | 18.42 |
| AT2G28160.1 | Thale cress | nucleus | 17.78 | 17.61 |
| AT2G16910.1 | Thale cress | nucleus | 25.71 | 14.19 |
| AT1G10610.1 | Thale cress | nucleus | 17.46 | 12.47 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:830922 | ProteinID:AED91564.1 | EMBL:AF488594 | ArrayExpress:AT5G10570 |
| EnsemblPlantsGene:AT5G10570 | RefSeq:AT5G10570 | TAIR:AT5G10570 | RefSeq:AT5G10570-TAIR-G | EnsemblPlants:AT5G10570.1 | TAIR:AT5G10570.1 |
| ProteinID:CAB89386.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_196619.1 |
| PFAM:PF00010 | PO:PO:0000293 | PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF6 | UniProt:Q9LXA9 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000009D6D1 | InterPro:bHLH_dom | SEG:seg | : |
Description
BHLH61Transcription factor bHLH61 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA9]
Coordinates
chr5:+:3341200..3343079
Molecular Weight (calculated)
35556.2 Da
IEP (calculated)
4.797
GRAVY (calculated)
-0.510
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: METELTQLRK QESNNLNGVN GGFMAIDQFV PNDWNFDYLC FNNLLQEDDN IDHPSSSSLM NLISQPPPLL HQPPQPSSPL YDSPPLSSAF DYPFLEDIIH
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.