Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69821 | Canola | nucleus | 95.97 | 94.39 |
| Bra009022.1-P | Field mustard | nucleus | 94.97 | 93.4 |
| CDX97028 | Canola | cytosol, plastid, vacuole | 28.52 | 85.0 |
| AT5G10570.1 | Thale cress | nucleus | 72.48 | 68.57 |
| KRH73107 | Soybean | mitochondrion, nucleus | 33.22 | 60.74 |
| CDY08769 | Canola | nucleus | 67.11 | 55.71 |
| CDY69978 | Canola | nucleus | 65.1 | 54.19 |
| CDY37835 | Canola | nucleus | 64.77 | 53.91 |
| KRG99605 | Soybean | cytosol | 26.85 | 50.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.93 | 50.21 |
| GSMUA_Achr1P26300_001 | Banana | nucleus | 40.27 | 50.21 |
| GSMUA_Achr7P03930_001 | Banana | nucleus | 38.93 | 48.95 |
| TraesCS4D01G328700.1 | Wheat | cytosol | 21.81 | 44.52 |
| VIT_00s1312g00010.t01 | Wine grape | nucleus | 48.66 | 43.81 |
| PGSC0003DMT400026937 | Potato | nucleus | 46.98 | 42.94 |
| Solyc02g063430.2.1 | Tomato | nucleus | 45.64 | 42.37 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 40.6 | 42.31 |
| KRH39520 | Soybean | nucleus | 46.31 | 41.44 |
| KRH74438 | Soybean | nucleus | 46.31 | 41.32 |
| VIT_17s0000g03550.t01 | Wine grape | nucleus | 44.63 | 41.3 |
| VIT_18s0001g08040.t01 | Wine grape | nucleus | 45.97 | 41.02 |
| Solyc02g091690.2.1 | Tomato | nucleus | 44.97 | 40.73 |
| KRH62159 | Soybean | nucleus | 44.97 | 40.61 |
| KRH52870 | Soybean | nucleus | 44.63 | 40.18 |
| PGSC0003DMT400078675 | Potato | nucleus | 44.63 | 39.7 |
| CDX98033 | Canola | nucleus | 24.5 | 39.46 |
| CDY19416 | Canola | nucleus | 24.5 | 39.46 |
| KRH45479 | Soybean | nucleus | 41.95 | 39.06 |
| KRH16909 | Soybean | nucleus | 43.96 | 38.99 |
| KRH16156 | Soybean | nucleus | 35.57 | 38.97 |
| KRH72519 | Soybean | nucleus | 42.95 | 38.44 |
| TraesCS4B01G331900.1 | Wheat | nucleus | 36.58 | 35.74 |
| Os03t0135700-01 | Rice | nucleus | 39.26 | 33.05 |
| TraesCS3A01G057900.1 | Wheat | nucleus | 35.57 | 32.42 |
| EER92904 | Sorghum | nucleus | 40.27 | 32.17 |
| Zm00001d027546_P001 | Maize | nucleus | 39.6 | 32.07 |
| TraesCS4D01G328900.1 | Wheat | nucleus | 36.91 | 31.61 |
| TraesCS3D01G058100.1 | Wheat | nucleus | 31.21 | 31.42 |
| TraesCS5A01G503300.1 | Wheat | nucleus | 36.91 | 31.16 |
| TraesCS4D01G329000.2 | Wheat | nucleus | 36.91 | 31.16 |
| TraesCS4D01G329100.1 | Wheat | nucleus | 36.58 | 31.14 |
| TraesCS5A01G503500.1 | Wheat | nucleus | 36.58 | 30.97 |
| TraesCS4D01G328800.1 | Wheat | nucleus | 36.58 | 30.88 |
| TraesCSU01G069400.1 | Wheat | nucleus | 36.24 | 30.68 |
| TraesCS3A01G058000.1 | Wheat | nucleus | 30.87 | 30.67 |
| TraesCS4B01G332000.1 | Wheat | nucleus | 35.57 | 30.55 |
| TraesCS3B01G070400.1 | Wheat | nucleus | 31.21 | 30.49 |
| HORVU4Hr1G080890.1 | Barley | nucleus | 36.24 | 30.42 |
| TraesCS5A01G503400.1 | Wheat | nucleus | 35.23 | 29.09 |
| TraesCSU01G069300.1 | Wheat | nucleus | 31.54 | 26.7 |
| CDY30182 | Canola | nucleus | 18.12 | 22.13 |
| CDX68608 | Canola | nucleus | 19.46 | 22.05 |
| CDY43542 | Canola | nucleus | 19.46 | 22.05 |
| CDY46719 | Canola | nucleus | 19.13 | 21.59 |
| CDX99537 | Canola | endoplasmic reticulum, golgi, mitochondrion, plastid | 14.09 | 20.79 |
| CDY28529 | Canola | nucleus | 29.53 | 20.05 |
| CDY11882 | Canola | nucleus | 16.11 | 19.51 |
| CDY42237 | Canola | nucleus | 15.77 | 19.42 |
| CDX88610 | Canola | nucleus | 15.77 | 19.11 |
| CDY38270 | Canola | nucleus | 15.77 | 19.11 |
| CDY21073 | Canola | nucleus | 27.52 | 19.03 |
| CDY47924 | Canola | nucleus | 15.44 | 18.7 |
| CDY34601 | Canola | nucleus | 27.85 | 18.69 |
| CDY48974 | Canola | nucleus | 28.86 | 17.95 |
| CDY30505 | Canola | nucleus | 18.79 | 17.83 |
| CDX77160 | Canola | nucleus | 18.79 | 17.72 |
| CDX71377 | Canola | nucleus | 18.46 | 17.41 |
| CDY04543 | Canola | nucleus | 18.12 | 17.09 |
| CDY31199 | Canola | nucleus | 17.45 | 16.61 |
| CDX83286 | Canola | nucleus | 17.45 | 16.61 |
| CDY03557 | Canola | cytosol, nucleus, plastid | 8.39 | 15.82 |
| CDY52738 | Canola | cytosol | 8.05 | 14.55 |
| CDY54227 | Canola | nucleus | 18.12 | 14.21 |
| CDY34878 | Canola | cytosol | 17.79 | 13.8 |
| CDY37964 | Canola | nucleus | 18.79 | 13.79 |
| CDX93399 | Canola | nucleus | 17.79 | 12.93 |
| CDY31399 | Canola | nucleus | 24.5 | 12.87 |
| CDX71316 | Canola | nucleus | 24.16 | 12.68 |
| CDX89760 | Canola | nucleus | 23.49 | 12.32 |
| CDY02227 | Canola | nucleus | 23.49 | 12.32 |
Protein Annotations
| EnsemblPlants:CDX97027 | EnsemblPlantsGene:GSBRNA2T00103989001 | Gene3D:4.10.280.10 | GO:A0A078E7M1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF6 | PFscan:PS50888 | ProteinID:CDX97027 | ProteinID:CDX97027.1 |
| SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF26DA | MapMan:15.5.32 | : |
Description
BnaC09g45980D
Coordinates
chrLK031897:+:260952..262405
Molecular Weight (calculated)
33407.3 Da
IEP (calculated)
4.843
GRAVY (calculated)
-0.603
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMEWTQISK QESNNHDFFP SGRNLEYLCF NNPLHEDDNN VDHTFSSLMD LISQPPPLLH QPPQPSSSPT PFFSSTFDYP LLETLQDVIE SPYYPPLGIS
101: ASQEGNNNDN SSPLVEESKS LMSTGETNKK KRNKKVVGQP SKNLMAERRR RKRLNDRLSM LRSIMDRTSI LGDAIEYMKE LLNKINKLQE LGSNSDLKDS
201: LTTNQSMVRN SPKFEVDQRE VNTHIDICCS TQPGLLLSTV GTLEINLGLE IQQCVISCFS DFSLQATCSE VAGNSECITS EDIKQALIKN AGYGGRCS
101: ASQEGNNNDN SSPLVEESKS LMSTGETNKK KRNKKVVGQP SKNLMAERRR RKRLNDRLSM LRSIMDRTSI LGDAIEYMKE LLNKINKLQE LGSNSDLKDS
201: LTTNQSMVRN SPKFEVDQRE VNTHIDICCS TQPGLLLSTV GTLEINLGLE IQQCVISCFS DFSLQATCSE VAGNSECITS EDIKQALIKN AGYGGRCS
001: METELTQLRK QESNNLNGVN GGFMAIDQFV PNDWNFDYLC FNNLLQEDDN IDHPSSSSLM NLISQPPPLL HQPPQPSSPL YDSPPLSSAF DYPFLEDIIH
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
Arabidopsis Description
BHLH61Transcription factor bHLH61 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.