Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020462.1-P | Field mustard | nucleus | 99.59 | 99.59 |
| CDY42237 | Canola | nucleus | 96.34 | 97.93 |
| CDY38270 | Canola | nucleus | 93.9 | 93.9 |
| CDY52738 | Canola | cytosol | 62.2 | 92.73 |
| CDX88610 | Canola | nucleus | 89.84 | 89.84 |
| CDY11882 | Canola | nucleus | 86.99 | 86.99 |
| AT5G57150.4 | Thale cress | nucleus | 82.93 | 77.27 |
| VIT_11s0052g00100.t01 | Wine grape | nucleus | 60.16 | 60.66 |
| KRH12334 | Soybean | nucleus | 58.54 | 59.26 |
| KRH37338 | Soybean | nucleus | 58.54 | 59.02 |
| CDY30182 | Canola | nucleus | 54.88 | 55.33 |
| CDY46719 | Canola | nucleus | 59.35 | 55.3 |
| CDY43542 | Canola | nucleus | 56.91 | 53.23 |
| KRH19109 | Soybean | nucleus | 49.59 | 52.81 |
| CDX68608 | Canola | nucleus | 56.1 | 52.47 |
| PGSC0003DMT400010463 | Potato | nucleus | 52.85 | 51.59 |
| Solyc07g018010.2.1 | Tomato | nucleus | 52.85 | 51.38 |
| PGSC0003DMT400044959 | Potato | nucleus | 45.53 | 48.48 |
| Solyc05g014590.2.1 | Tomato | nucleus | 44.31 | 47.19 |
| GSMUA_Achr7P16000_001 | Banana | nucleus | 47.56 | 45.0 |
| GSMUA_Achr6P30900_001 | Banana | nucleus | 37.4 | 43.81 |
| KRH02772 | Soybean | nucleus | 55.28 | 40.0 |
| TraesCS2D01G270300.1 | Wheat | nucleus | 44.31 | 39.21 |
| TraesCS2A01G271700.1 | Wheat | nucleus | 43.9 | 38.85 |
| TraesCS2B01G289900.1 | Wheat | nucleus | 43.5 | 38.49 |
| Zm00001d024522_P001 | Maize | nucleus | 40.24 | 38.37 |
| Zm00001d025141_P003 | Maize | nucleus | 39.43 | 37.02 |
| CDY03557 | Canola | cytosol, nucleus, plastid | 23.17 | 36.08 |
| HORVU2Hr1G066100.1 | Barley | cytosol, nucleus | 44.31 | 35.74 |
| EES14602 | Sorghum | nucleus | 41.06 | 35.07 |
| TraesCS2D01G270000.2 | Wheat | nucleus | 37.8 | 34.7 |
| TraesCS2B01G289700.2 | Wheat | nucleus | 37.8 | 33.94 |
| Os04t0301500-01 | Rice | nucleus | 41.46 | 32.9 |
| GSMUA_Achr4P12700_001 | Banana | nucleus | 39.02 | 32.54 |
| TraesCS5A01G533900.1 | Wheat | nucleus | 30.08 | 31.36 |
| TraesCS3B01G018400.1 | Wheat | nucleus | 33.74 | 31.32 |
| TraesCS5A01G533200.1 | Wheat | nucleus | 32.11 | 30.86 |
| TraesCSU01G138900.1 | Wheat | nucleus | 32.11 | 30.74 |
| HORVU2Hr1G066090.2 | Barley | cytosol | 19.11 | 30.72 |
| TraesCSU01G138400.2 | Wheat | nucleus | 31.3 | 30.68 |
| HORVU4Hr1G087590.1 | Barley | nucleus | 31.71 | 30.35 |
| TraesCS4B01G364800.1 | Wheat | nucleus | 30.89 | 29.69 |
| EES05013 | Sorghum | nucleus | 33.74 | 29.43 |
| Zm00001d004095_P001 | Maize | nucleus | 36.59 | 29.32 |
| HORVU4Hr1G087610.1 | Barley | nucleus | 29.67 | 29.08 |
| Os04t0300600-00 | Rice | cytosol | 33.74 | 28.14 |
| TraesCS3A01G028200.3 | Wheat | nucleus | 30.89 | 28.04 |
| CDX98033 | Canola | nucleus | 20.33 | 27.03 |
| CDY19416 | Canola | nucleus | 20.33 | 27.03 |
| TraesCS3A01G442600.1 | Wheat | nucleus | 31.71 | 26.71 |
| HORVU2Hr1G066000.7 | Barley | nucleus | 29.27 | 26.28 |
| TraesCS3D01G435200.1 | Wheat | nucleus | 32.52 | 25.32 |
| HORVU3Hr1G005500.3 | Barley | cytosol, nucleus | 33.33 | 25.31 |
| TraesCS3D01G017700.1 | Wheat | nucleus | 33.33 | 22.04 |
| CDY31199 | Canola | nucleus | 25.2 | 19.81 |
| CDX83286 | Canola | nucleus | 25.2 | 19.81 |
| CDY30505 | Canola | nucleus | 25.2 | 19.75 |
| CDX77160 | Canola | nucleus | 25.2 | 19.62 |
| CDX71377 | Canola | nucleus | 24.8 | 19.3 |
| CDY04543 | Canola | nucleus | 24.39 | 18.99 |
| CDY37835 | Canola | nucleus | 23.58 | 16.2 |
| CDY69978 | Canola | nucleus | 23.17 | 15.92 |
| CDY08769 | Canola | nucleus | 22.76 | 15.6 |
| CDX97027 | Canola | nucleus | 18.7 | 15.44 |
| CDX69821 | Canola | nucleus | 18.7 | 15.18 |
| CDX99537 | Canola | endoplasmic reticulum, golgi, mitochondrion, plastid | 11.38 | 13.86 |
| CDY34878 | Canola | cytosol | 21.54 | 13.8 |
| CDY54227 | Canola | nucleus | 21.14 | 13.68 |
| CDY37964 | Canola | nucleus | 20.73 | 12.56 |
| CDY34601 | Canola | nucleus | 22.36 | 12.39 |
| CDY21073 | Canola | nucleus | 21.54 | 12.3 |
| CDX93399 | Canola | nucleus | 20.33 | 12.2 |
| CDY28529 | Canola | nucleus | 21.54 | 12.07 |
| CDY48974 | Canola | nucleus | 21.95 | 11.27 |
| CDX97028 | Canola | cytosol, plastid, vacuole | 4.47 | 11.0 |
| CDX89760 | Canola | nucleus | 25.2 | 10.92 |
| CDY31399 | Canola | nucleus | 24.8 | 10.76 |
| CDY02227 | Canola | nucleus | 24.8 | 10.74 |
| CDX71316 | Canola | nucleus | 24.39 | 10.56 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078IEW9 | UniProt:A0A078IEW9 | EnsemblPlants:CDY47924 | ProteinID:CDY47924 |
| ProteinID:CDY47924.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00088533001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR31945 | PANTHER:PTHR31945:SF26 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EDB00F | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g08320DBnaA02g08320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEW9]
Coordinates
chrLK032745:+:14296..16916
Molecular Weight (calculated)
27974.9 Da
IEP (calculated)
4.358
GRAVY (calculated)
-0.446
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MENIDQEFNN YWEHNSFLQN EDFEYDSWPL EEAISGSYDS SSPDGAASSP ASKNIVSERN RRQKLNQRLF ALRSVVPNIT KMDKASIIKD AISYIQGLQY
101: EESKLEAEIR ELESTPKSCL SFSKDFDPDL LVPVTSKKMK QLDSGSSRSL IEVIELKVTS MGERIMVVNV TCNKRTDTMV KLCEVFESLN LKILTSNLNS
201: FSGMIFNTLF IEADEEEQEV VRLKIETGIG AYNETQSPTW SIDSLY
101: EESKLEAEIR ELESTPKSCL SFSKDFDPDL LVPVTSKKMK QLDSGSSRSL IEVIELKVTS MGERIMVVNV TCNKRTDTMV KLCEVFESLN LKILTSNLNS
201: FSGMIFNTLF IEADEEEQEV VRLKIETGIG AYNETQSPTW SIDSLY
001: MEDIVDQELS NYWEPSSFLQ NEDFEYDSWP LEEAISGSYD SSSPDGAASS PASKNIVSER NRRQKLNQRL FALRSVVPNI TKMDKASIIK DAISYIEGLQ
101: YEEKKLEAEI RELESTPKSS LSFSKDFDRD LLVPVTSKKM KQLDSGSSTS LIEVLELKVT FMGERTMVVS VTCNKRTDTM VKLCEVFESL NLKILTSNLT
201: SFSGMIFHTV FIEADEEEQE VLRLKIETGI GAYNETQSPT LSIDSLY
101: YEEKKLEAEI RELESTPKSS LSFSKDFDRD LLVPVTSKKM KQLDSGSSTS LIEVLELKVT FMGERTMVVS VTCNKRTDTM VKLCEVFESL NLKILTSNLT
201: SFSGMIFHTV FIEADEEEQE VLRLKIETGI GAYNETQSPT LSIDSLY
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.