Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93399 | Canola | nucleus | 93.35 | 92.44 |
| CDY34878 | Canola | cytosol | 74.38 | 78.65 |
| CDY54227 | Canola | nucleus | 72.17 | 77.11 |
| AT1G10610.1 | Thale cress | nucleus | 70.2 | 64.63 |
| Solyc05g005300.2.1 | Tomato | nucleus | 33.5 | 28.22 |
| KRH45665 | Soybean | nucleus | 33.0 | 27.02 |
| CDY02227 | Canola | nucleus | 31.77 | 22.71 |
| CDX89760 | Canola | nucleus | 31.28 | 22.36 |
| CDY38270 | Canola | nucleus | 13.55 | 22.36 |
| VIT_01s0127g00650.t01 | Wine grape | nucleus | 9.61 | 22.16 |
| CDY31399 | Canola | nucleus | 30.3 | 21.69 |
| CDX71316 | Canola | nucleus | 30.3 | 21.65 |
| CDX88610 | Canola | nucleus | 13.05 | 21.54 |
| CDY30182 | Canola | nucleus | 12.81 | 21.31 |
| CDY42237 | Canola | nucleus | 12.56 | 21.07 |
| CDY47924 | Canola | nucleus | 12.56 | 20.73 |
| CDY11882 | Canola | nucleus | 12.56 | 20.73 |
| CDX98033 | Canola | nucleus | 9.36 | 20.54 |
| CDY19416 | Canola | nucleus | 9.36 | 20.54 |
| CDY43542 | Canola | nucleus | 12.81 | 19.77 |
| CDX68608 | Canola | nucleus | 12.81 | 19.77 |
| CDY46719 | Canola | nucleus | 12.81 | 19.7 |
| CDX97027 | Canola | nucleus | 13.79 | 18.79 |
| CDX69821 | Canola | nucleus | 13.79 | 18.48 |
| CDX83286 | Canola | nucleus | 14.04 | 18.21 |
| CDY31199 | Canola | nucleus | 13.79 | 17.89 |
| CDY52738 | Canola | cytosol | 6.9 | 16.97 |
| CDX71377 | Canola | nucleus | 13.05 | 16.77 |
| CDY04543 | Canola | nucleus | 12.81 | 16.46 |
| CDY30505 | Canola | nucleus | 12.56 | 16.24 |
| CDX77160 | Canola | nucleus | 12.56 | 16.14 |
| CDY37835 | Canola | nucleus | 14.04 | 15.92 |
| CDY69978 | Canola | nucleus | 14.04 | 15.92 |
| CDY08769 | Canola | nucleus | 14.04 | 15.88 |
| CDX99537 | Canola | endoplasmic reticulum, golgi, mitochondrion, plastid | 7.88 | 15.84 |
| CDY03557 | Canola | cytosol, nucleus, plastid | 5.67 | 14.56 |
| CDX97028 | Canola | cytosol, plastid, vacuole | 3.45 | 14.0 |
| CDY28529 | Canola | nucleus | 13.3 | 12.3 |
| CDY21073 | Canola | nucleus | 12.56 | 11.83 |
| CDY34601 | Canola | nucleus | 12.56 | 11.49 |
| CDY48974 | Canola | nucleus | 12.81 | 10.86 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078HKV7 | UniProt:A0A078HKV7 | EnsemblPlants:CDY37964 | ProteinID:CDY37964 |
| ProteinID:CDY37964.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00064999001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 |
| PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF14 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0004EF0A50 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaC05g08100DBnaC05g08100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKV7]
Coordinates
chrLK032413:-:64128..66223
Molecular Weight (calculated)
46682.2 Da
IEP (calculated)
6.046
GRAVY (calculated)
-0.446
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRGGERVKE FLRPFVDSRE WDFCVIWKLG DDPSRFIEWV GCCCSGSYID KNIKHEHVEE ETQNTSSICR DEDNKHHIRT LACEALSRFP LFMPLYPGIH
101: GEVVMSKSPK WLVNSGPGSK QDIFSTRVLV PVRDGLVELF SFIMKPVDES MVDLIISHCN TFVEPYPEKT LPFRIISKAE ESMLMHKEED VVMQNTIDDK
201: KVAKENFKSK NLHSERKRRE RINQRIYALR AVVPNVTKVL PENSFQMNKN GTLSDAVDYI NQLLVEKQKL EDELRGINEI ESRRIAAEEE SAIANPQAEK
301: VASRLNKIVN SEVNLEVHET GERGFLIRIA QEHKQDGFIR LIETVDSCGL EIIDVNFTRL DLRVMTVLNV KATKDGTTPE NLRDLLIKMM MRTSENPNAE
401: SLRQCA
101: GEVVMSKSPK WLVNSGPGSK QDIFSTRVLV PVRDGLVELF SFIMKPVDES MVDLIISHCN TFVEPYPEKT LPFRIISKAE ESMLMHKEED VVMQNTIDDK
201: KVAKENFKSK NLHSERKRRE RINQRIYALR AVVPNVTKVL PENSFQMNKN GTLSDAVDYI NQLLVEKQKL EDELRGINEI ESRRIAAEEE SAIANPQAEK
301: VASRLNKIVN SEVNLEVHET GERGFLIRIA QEHKQDGFIR LIETVDSCGL EIIDVNFTRL DLRVMTVLNV KATKDGTTPE NLRDLLIKMM MRTSENPNAE
401: SLRQCA
001: MMMMRGGERV KEFLRPFVDS RTWDLCVIWK LGDDPSRFIE WVGCCCSGCY IDKNIKLENS EEGGTGRKKK ASFCRDDHNK HRIRTLACEA LSRFPLFMPL
101: YPGIHGEVVM SKSPKWLVNS GSKMEMFSTR VLVPVSDGLV ELFAFDMRPF DESMVHLIMS RCTTFFEPFP EQRLQFRIIP RAEESMSSGV NLSVEGGGSS
201: SVSNPSSETQ NLFGNYPNAS CVEILREEQT PCLIMNKEKD VVVQNANDSK ANKKLLPTEN FKSKNLHSER KRRERINQAM YGLRAVVPKI TKLNKIGIFS
301: DAVDYINELL VEKQKLEDEL KGINEMECKE IAAEEQSAIA DPEAERVSSK SNKRVKKNEV KIEVHETGER DFLIRVVQEH KQDGFKRLIE AVDLCELEII
401: DVNFTRLDLT VMTVLNVKAN KDGIACGILR DLLLKMMITS I
101: YPGIHGEVVM SKSPKWLVNS GSKMEMFSTR VLVPVSDGLV ELFAFDMRPF DESMVHLIMS RCTTFFEPFP EQRLQFRIIP RAEESMSSGV NLSVEGGGSS
201: SVSNPSSETQ NLFGNYPNAS CVEILREEQT PCLIMNKEKD VVVQNANDSK ANKKLLPTEN FKSKNLHSER KRRERINQAM YGLRAVVPKI TKLNKIGIFS
301: DAVDYINELL VEKQKLEDEL KGINEMECKE IAAEEQSAIA DPEAERVSSK SNKRVKKNEV KIEVHETGER DFLIRVVQEH KQDGFKRLIE AVDLCELEII
401: DVNFTRLDLT VMTVLNVKAN KDGIACGILR DLLLKMMITS I
Arabidopsis Description
BHLH90Transcription factor bHLH90 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNR2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.