Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009022.1-P | Field mustard | nucleus | 97.69 | 97.69 |
| CDX97027 | Canola | nucleus | 94.39 | 95.97 |
| CDX97028 | Canola | cytosol, plastid, vacuole | 28.38 | 86.0 |
| AT5G10570.1 | Thale cress | nucleus | 71.95 | 69.21 |
| KRH73107 | Soybean | mitochondrion, nucleus | 32.34 | 60.12 |
| CDY08769 | Canola | nucleus | 66.01 | 55.71 |
| CDY69978 | Canola | nucleus | 64.03 | 54.19 |
| CDY37835 | Canola | nucleus | 63.7 | 53.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.6 | 50.63 |
| GSMUA_Achr1P26300_001 | Banana | nucleus | 39.93 | 50.63 |
| KRG99605 | Soybean | cytosol | 26.07 | 50.0 |
| GSMUA_Achr7P03930_001 | Banana | nucleus | 38.61 | 49.37 |
| TraesCS4D01G328700.1 | Wheat | cytosol | 21.12 | 43.84 |
| PGSC0003DMT400026937 | Potato | nucleus | 46.53 | 43.25 |
| VIT_00s1312g00010.t01 | Wine grape | nucleus | 47.19 | 43.2 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 40.59 | 43.01 |
| Solyc02g063430.2.1 | Tomato | nucleus | 45.21 | 42.68 |
| KRH39520 | Soybean | nucleus | 45.87 | 41.74 |
| KRH74438 | Soybean | nucleus | 45.87 | 41.62 |
| VIT_18s0001g08040.t01 | Wine grape | nucleus | 45.21 | 41.02 |
| VIT_17s0000g03550.t01 | Wine grape | nucleus | 43.56 | 40.99 |
| KRH52870 | Soybean | nucleus | 44.55 | 40.79 |
| KRH62159 | Soybean | nucleus | 44.22 | 40.61 |
| Solyc02g091690.2.1 | Tomato | nucleus | 43.89 | 40.43 |
| KRH45479 | Soybean | nucleus | 41.91 | 39.69 |
| CDY19416 | Canola | nucleus | 24.09 | 39.46 |
| CDX98033 | Canola | nucleus | 24.09 | 39.46 |
| PGSC0003DMT400078675 | Potato | nucleus | 43.56 | 39.4 |
| KRH16909 | Soybean | nucleus | 43.23 | 38.99 |
| KRH16156 | Soybean | nucleus | 34.65 | 38.6 |
| KRH72519 | Soybean | nucleus | 42.24 | 38.44 |
| TraesCS4B01G331900.1 | Wheat | nucleus | 35.64 | 35.41 |
| Os03t0135700-01 | Rice | nucleus | 38.28 | 32.77 |
| TraesCS3A01G057900.1 | Wheat | nucleus | 34.98 | 32.42 |
| Zm00001d027546_P001 | Maize | nucleus | 38.94 | 32.07 |
| EER92904 | Sorghum | nucleus | 39.27 | 31.9 |
| TraesCS3D01G058100.1 | Wheat | nucleus | 30.69 | 31.42 |
| TraesCS4D01G328900.1 | Wheat | nucleus | 35.97 | 31.32 |
| TraesCS5A01G503300.1 | Wheat | nucleus | 35.97 | 30.88 |
| TraesCS4D01G329000.2 | Wheat | nucleus | 35.97 | 30.88 |
| TraesCS4D01G329100.1 | Wheat | nucleus | 35.64 | 30.86 |
| TraesCS5A01G503500.1 | Wheat | nucleus | 35.64 | 30.68 |
| TraesCS3A01G058000.1 | Wheat | nucleus | 30.36 | 30.67 |
| TraesCS4D01G328800.1 | Wheat | nucleus | 35.64 | 30.59 |
| TraesCS3B01G070400.1 | Wheat | nucleus | 30.69 | 30.49 |
| TraesCSU01G069400.1 | Wheat | nucleus | 35.31 | 30.4 |
| TraesCS4B01G332000.1 | Wheat | nucleus | 34.65 | 30.26 |
| HORVU4Hr1G080890.1 | Barley | nucleus | 35.31 | 30.14 |
| TraesCS5A01G503400.1 | Wheat | nucleus | 34.32 | 28.81 |
| TraesCSU01G069300.1 | Wheat | nucleus | 30.69 | 26.42 |
| CDY30182 | Canola | nucleus | 18.15 | 22.54 |
| CDX68608 | Canola | nucleus | 19.47 | 22.43 |
| CDY43542 | Canola | nucleus | 19.47 | 22.43 |
| CDY46719 | Canola | nucleus | 19.14 | 21.97 |
| CDX99537 | Canola | endoplasmic reticulum, golgi, mitochondrion, plastid | 13.86 | 20.79 |
| CDY28529 | Canola | nucleus | 28.71 | 19.82 |
| CDY11882 | Canola | nucleus | 15.84 | 19.51 |
| CDX88610 | Canola | nucleus | 15.51 | 19.11 |
| CDY38270 | Canola | nucleus | 15.51 | 19.11 |
| CDY21073 | Canola | nucleus | 27.06 | 19.03 |
| CDY42237 | Canola | nucleus | 15.18 | 19.01 |
| CDY47924 | Canola | nucleus | 15.18 | 18.7 |
| CDY34601 | Canola | nucleus | 27.39 | 18.69 |
| CDY48974 | Canola | nucleus | 28.71 | 18.16 |
| CDY30505 | Canola | nucleus | 18.48 | 17.83 |
| CDX77160 | Canola | nucleus | 18.48 | 17.72 |
| CDX71377 | Canola | nucleus | 18.15 | 17.41 |
| CDY04543 | Canola | nucleus | 17.82 | 17.09 |
| CDX83286 | Canola | nucleus | 17.16 | 16.61 |
| CDY31199 | Canola | nucleus | 17.16 | 16.61 |
| CDY03557 | Canola | cytosol, nucleus, plastid | 8.58 | 16.46 |
| CDY52738 | Canola | cytosol | 7.92 | 14.55 |
| CDY54227 | Canola | nucleus | 17.49 | 13.95 |
| CDY34878 | Canola | cytosol | 17.49 | 13.8 |
| CDY37964 | Canola | nucleus | 18.48 | 13.79 |
| CDX93399 | Canola | nucleus | 17.49 | 12.93 |
| CDX71316 | Canola | nucleus | 23.76 | 12.68 |
| CDY31399 | Canola | nucleus | 23.43 | 12.52 |
| CDY02227 | Canola | nucleus | 22.44 | 11.97 |
| CDX89760 | Canola | nucleus | 22.44 | 11.97 |
Protein Annotations
| EnsemblPlants:CDX69821 | EnsemblPlantsGene:GSBRNA2T00135878001 | Gene3D:4.10.280.10 | GO:A0A078BYK6 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR31945 | PANTHER:PTHR31945:SF6 | PFscan:PS50888 | ProteinID:CDX69821 | ProteinID:CDX69821.1 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEE344 | MapMan:15.5.32 | : | : |
Description
BnaA10g21700D
Coordinates
chrLK031790:-:1964574..1966046
Molecular Weight (calculated)
33901.8 Da
IEP (calculated)
4.563
GRAVY (calculated)
-0.619
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMEWTQISK QESNNHDDNY GDFFPSGRNL EYLCFNNPLQ EDVNNIDHTF SSLMDLISQP PPLLHQPPQP SSSPTPFFSS SFDYPLPETL QDVTESPYYP
101: PLGLSASQEG NNNDNSSPLV EESKSFMSTG ETNKKMRSKK VVGQPSKNLM AERRRRKRLN DRLSMLRSIM DRTSILGDAI EYMKELLDKI NKLQELGSNS
201: DLKDSLTTNQ SMVKNSPKFE VDQREVNTHI DICCSTQPGL LLSTVGTLEI NLGLEIQQCV ISCFSDFSLQ ATCSEVAGNS ECITSEDIKQ ALIKNAGYGG
301: RCS
101: PLGLSASQEG NNNDNSSPLV EESKSFMSTG ETNKKMRSKK VVGQPSKNLM AERRRRKRLN DRLSMLRSIM DRTSILGDAI EYMKELLDKI NKLQELGSNS
201: DLKDSLTTNQ SMVKNSPKFE VDQREVNTHI DICCSTQPGL LLSTVGTLEI NLGLEIQQCV ISCFSDFSLQ ATCSEVAGNS ECITSEDIKQ ALIKNAGYGG
301: RCS
001: METELTQLRK QESNNLNGVN GGFMAIDQFV PNDWNFDYLC FNNLLQEDDN IDHPSSSSLM NLISQPPPLL HQPPQPSSPL YDSPPLSSAF DYPFLEDIIH
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
101: SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI
201: NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT
301: KQALIRNAGY GGRCL
Arabidopsis Description
BHLH61Transcription factor bHLH61 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.