Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031723.1-P | Field mustard | cytosol | 97.4 | 96.89 |
| CDY54227 | Canola | nucleus | 88.8 | 89.74 |
| CDX93399 | Canola | nucleus | 79.95 | 74.88 |
| CDY37964 | Canola | nucleus | 78.65 | 74.38 |
| AT1G10610.1 | Thale cress | nucleus | 74.48 | 64.85 |
| Solyc05g005300.2.1 | Tomato | nucleus | 36.98 | 29.46 |
| KRH45665 | Soybean | nucleus | 35.42 | 27.42 |
| VIT_01s0127g00650.t01 | Wine grape | nucleus | 10.94 | 23.86 |
| CDY38270 | Canola | nucleus | 14.06 | 21.95 |
| CDY02227 | Canola | nucleus | 32.29 | 21.83 |
| CDX71316 | Canola | nucleus | 32.03 | 21.65 |
| CDX88610 | Canola | nucleus | 13.8 | 21.54 |
| CDY47924 | Canola | nucleus | 13.8 | 21.54 |
| CDY31399 | Canola | nucleus | 31.77 | 21.52 |
| CDX89760 | Canola | nucleus | 31.77 | 21.48 |
| CDX98033 | Canola | nucleus | 10.16 | 21.08 |
| CDY19416 | Canola | nucleus | 10.16 | 21.08 |
| CDY11882 | Canola | nucleus | 13.28 | 20.73 |
| CDY42237 | Canola | nucleus | 13.02 | 20.66 |
| CDY30182 | Canola | nucleus | 12.76 | 20.08 |
| CDX68608 | Canola | nucleus | 13.28 | 19.39 |
| CDY43542 | Canola | nucleus | 13.28 | 19.39 |
| CDY46719 | Canola | nucleus | 12.76 | 18.56 |
| CDX83286 | Canola | nucleus | 15.1 | 18.53 |
| CDY31199 | Canola | nucleus | 14.84 | 18.21 |
| CDX97027 | Canola | nucleus | 13.8 | 17.79 |
| CDX69821 | Canola | nucleus | 13.8 | 17.49 |
| CDY37835 | Canola | nucleus | 15.89 | 17.04 |
| CDY69978 | Canola | nucleus | 15.89 | 17.04 |
| CDY08769 | Canola | nucleus | 15.89 | 16.99 |
| CDX71377 | Canola | nucleus | 13.8 | 16.77 |
| CDY04543 | Canola | nucleus | 13.54 | 16.46 |
| CDY52738 | Canola | cytosol | 6.77 | 15.76 |
| CDY30505 | Canola | nucleus | 12.76 | 15.61 |
| CDX77160 | Canola | nucleus | 12.76 | 15.51 |
| CDX97028 | Canola | cytosol, plastid, vacuole | 3.65 | 14.0 |
| CDX99537 | Canola | endoplasmic reticulum, golgi, mitochondrion, plastid | 7.29 | 13.86 |
| CDY03557 | Canola | cytosol, nucleus, plastid | 5.47 | 13.29 |
| CDY28529 | Canola | nucleus | 13.54 | 11.85 |
| CDY21073 | Canola | nucleus | 12.5 | 11.14 |
| CDY34601 | Canola | nucleus | 12.76 | 11.04 |
| CDY48974 | Canola | nucleus | 13.28 | 10.65 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078HDG5 | UniProt:A0A078HDG5 | EnsemblPlants:CDY34878 | ProteinID:CDY34878 |
| ProteinID:CDY34878.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00057441001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 |
| PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF14 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0004EE8ABF | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaA09g48040DBnaA09g48040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDG5]
Coordinates
chrLK032342:-:291165..292797
Molecular Weight (calculated)
44116.1 Da
IEP (calculated)
5.697
GRAVY (calculated)
-0.373
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRGVERVKE VLRPLVDSRD WDFCVIWKLG DDPSRFIEWV GCCCSGSYTD KNIKHENVEE EEERQKMSSI CRDEHNKHHI RSLACEALSR FPLFIPLYPG
101: IHGEVVISKS PKWLVNSSPG SKHDIFRTRV LVPVRDGLVE LFSFTMKPVD ESMVDLIISR CNAFFEPFTE QTLPCMDQAP CLVMNKEEDV VMQDMTKENF
201: KSKNLHSERK RRERINQRIY ALRAIVPVIT KMNKNGTISD AVDYINELLV EKQKLEDELS GINEVECRAE EEAVIANPEA EKVSSKLNKN VNNEVNLEVH
301: ETGEGDFLIR VTQEHKRDGF KRLIEAVESC GLEIINVSFT RLDLTVMTIL NVKANKDGIT REDLRDLLFR MIITSVAGSV KHCT
101: IHGEVVISKS PKWLVNSSPG SKHDIFRTRV LVPVRDGLVE LFSFTMKPVD ESMVDLIISR CNAFFEPFTE QTLPCMDQAP CLVMNKEEDV VMQDMTKENF
201: KSKNLHSERK RRERINQRIY ALRAIVPVIT KMNKNGTISD AVDYINELLV EKQKLEDELS GINEVECRAE EEAVIANPEA EKVSSKLNKN VNNEVNLEVH
301: ETGEGDFLIR VTQEHKRDGF KRLIEAVESC GLEIINVSFT RLDLTVMTIL NVKANKDGIT REDLRDLLFR MIITSVAGSV KHCT
001: MMMMRGGERV KEFLRPFVDS RTWDLCVIWK LGDDPSRFIE WVGCCCSGCY IDKNIKLENS EEGGTGRKKK ASFCRDDHNK HRIRTLACEA LSRFPLFMPL
101: YPGIHGEVVM SKSPKWLVNS GSKMEMFSTR VLVPVSDGLV ELFAFDMRPF DESMVHLIMS RCTTFFEPFP EQRLQFRIIP RAEESMSSGV NLSVEGGGSS
201: SVSNPSSETQ NLFGNYPNAS CVEILREEQT PCLIMNKEKD VVVQNANDSK ANKKLLPTEN FKSKNLHSER KRRERINQAM YGLRAVVPKI TKLNKIGIFS
301: DAVDYINELL VEKQKLEDEL KGINEMECKE IAAEEQSAIA DPEAERVSSK SNKRVKKNEV KIEVHETGER DFLIRVVQEH KQDGFKRLIE AVDLCELEII
401: DVNFTRLDLT VMTVLNVKAN KDGIACGILR DLLLKMMITS I
101: YPGIHGEVVM SKSPKWLVNS GSKMEMFSTR VLVPVSDGLV ELFAFDMRPF DESMVHLIMS RCTTFFEPFP EQRLQFRIIP RAEESMSSGV NLSVEGGGSS
201: SVSNPSSETQ NLFGNYPNAS CVEILREEQT PCLIMNKEKD VVVQNANDSK ANKKLLPTEN FKSKNLHSER KRRERINQAM YGLRAVVPKI TKLNKIGIFS
301: DAVDYINELL VEKQKLEDEL KGINEMECKE IAAEEQSAIA DPEAERVSSK SNKRVKKNEV KIEVHETGER DFLIRVVQEH KQDGFKRLIE AVDLCELEII
401: DVNFTRLDLT VMTVLNVKAN KDGIACGILR DLLLKMMITS I
Arabidopsis Description
BHLH90Transcription factor bHLH90 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNR2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.