Factsheet for Solyc05g005300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34878	Canola	cytosol	29.46	36.98
CDY54227	Canola	nucleus	28.63	36.32
Bra031723.1-P	Field mustard	cytosol	29.05	36.27
AT1G10610.1	Thale cress	nucleus	31.54	34.47
KRH45665	Soybean	nucleus	35.27	34.27
CDX93399	Canola	nucleus	28.63	33.66
CDY37964	Canola	nucleus	28.22	33.5
Bra019914.1-P	Field mustard	cytosol	28.22	32.61
VIT_01s0127g00650.t01	Wine grape	nucleus	11.2	30.68
Solyc08g062780.1.1	Tomato	nucleus	28.22	22.82
Solyc05g014590.2.1	Tomato	nucleus	10.37	21.64
Solyc07g018010.2.1	Tomato	nucleus	10.58	20.16
Solyc06g051550.2.1	Tomato	cytosol	12.66	20.07
Solyc02g063430.2.1	Tomato	nucleus	13.28	19.94
Solyc02g091690.2.1	Tomato	nucleus	13.49	19.76
Solyc12g088130.1.1	Tomato	nucleus	11.41	16.37
Solyc03g118310.2.1	Tomato	nucleus	16.39	14.96
Solyc06g068870.2.1	Tomato	nucleus	14.73	13.37

Protein Annotations

EnsemblPlants:Solyc05g005300.2.1	EnsemblPlantsGene:Solyc05g005300.2	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:MYC/MYB_N	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR31945	PANTHER:PTHR31945:SF11	PFAM:PF00010	PFAM:PF14215	PFscan:PS50888
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002766C43	UniProt:K4BW61	MapMan:15.5.32	:

Description

Transcription factor bHLH90 [Source:Projected from Arabidopsis thaliana (AT1G10610) UniProtKB/Swiss-Prot;Acc:Q0WNR2]

Coordinates

chr5:-:240253..242750

Molecular Weight (calculated)

54016.2 Da

IEP (calculated)

6.084

GRAVY (calculated)

-0.394

Length

482 amino acids

Sequence
(BLAST)

001: MEKALEWLRP LVDSKNWEYC VVWKFGDDPS RFIEWMGCCC SGANGVDVNV KRENGGKQTF SSLCRDIQVQ HPIRTKACEA LAHFPHSISL YSGIQAEVVT
101: SNEPKWINHA EISNSNLSHE LKGTLVLIPV AGGLVELYNS KMIYKDQKTI NFIINRFKLG SEEANSSVAQ KEDQVLDFFP YEKSNFCAPL LQYATSFPSS
201: APHISQVSES SANPSIQGSS TGSIPSNELT LCHSPPDHLS RNVPLSQSTE GYFEHTELQC SGNLSRMEDT IFPWKQENYI VAGDMFSMGK KRQKGPYQSK
301: NLVTERKRRN RIKDGLFTLR ALVPNITKMD KVAILGDSID YINELQEKVK LYKIELNKIE AEVTNNESTP EMVLSDMTEM SKVTGQTNEK TQISVNTTDR
401: TRMEVEVNQI GAREFLLKVS GSRKPGGFTQ LMEAMNYLGL ELVNVSCTTS GGEIVSVYIV EANVDRFIDA QKLRSSLIEL TS

Best Arabidopsis Sequence Match ( AT1G10610.1 )
(BLAST)

001: MMMMRGGERV KEFLRPFVDS RTWDLCVIWK LGDDPSRFIE WVGCCCSGCY IDKNIKLENS EEGGTGRKKK ASFCRDDHNK HRIRTLACEA LSRFPLFMPL
101: YPGIHGEVVM SKSPKWLVNS GSKMEMFSTR VLVPVSDGLV ELFAFDMRPF DESMVHLIMS RCTTFFEPFP EQRLQFRIIP RAEESMSSGV NLSVEGGGSS
201: SVSNPSSETQ NLFGNYPNAS CVEILREEQT PCLIMNKEKD VVVQNANDSK ANKKLLPTEN FKSKNLHSER KRRERINQAM YGLRAVVPKI TKLNKIGIFS
301: DAVDYINELL VEKQKLEDEL KGINEMECKE IAAEEQSAIA DPEAERVSSK SNKRVKKNEV KIEVHETGER DFLIRVVQEH KQDGFKRLIE AVDLCELEII
401: DVNFTRLDLT VMTVLNVKAN KDGIACGILR DLLLKMMITS I

Arabidopsis Description

BHLH90Transcription factor bHLH90 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNR2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.