CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0127g00650.t01	Wine grape	nucleus	12.9	36.36
CDY54227	Canola	nucleus	27.42	35.79
Bra031723.1-P	Field mustard	cytosol	27.82	35.75
CDY34878	Canola	cytosol	27.42	35.42
Solyc05g005300.2.1	Tomato	nucleus	34.27	35.27
AT1G10610.1	Thale cress	nucleus	30.44	34.24
CDY37964	Canola	nucleus	27.02	33.0
CDX93399	Canola	nucleus	26.61	32.2
Bra019914.1-P	Field mustard	cytosol	26.81	31.89
KRH41065	Soybean	nucleus	7.06	25.18
KRH36073	Soybean	nucleus	28.83	25.04
KRH19109	Soybean	nucleus	11.49	24.68
KRH12334	Soybean	nucleus	11.9	24.28
KRG90676	Soybean	extracellular, vacuole	27.42	23.57
KRH37338	Soybean	nucleus	11.49	23.36
KRH25108	Soybean	nucleus	11.9	20.7
KRH22827	Soybean	nucleus	13.31	20.43
KRH73107	Soybean	mitochondrion, nucleus	6.65	20.25
KRH30560	Soybean	nucleus	12.7	20.19
KRH26533	Soybean	nucleus	12.9	19.88
KRH45479	Soybean	nucleus	11.9	18.44
KRH62159	Soybean	nucleus	12.1	18.18
KRH02772	Soybean	nucleus	12.1	17.65
KRH52870	Soybean	nucleus	11.69	17.52
KRH08406	Soybean	nucleus	15.12	16.89
KRH16909	Soybean	nucleus	11.29	16.67
KRH72519	Soybean	nucleus	10.89	16.22
KRH16156	Soybean	nucleus	8.87	16.18
KRH74438	Soybean	nucleus	10.89	16.17
KRH63854	Soybean	nucleus	15.12	16.13
KRH39520	Soybean	nucleus	10.69	15.92
KRH59747	Soybean	nucleus	15.32	15.73
KRH54112	Soybean	nucleus	14.52	15.58
KRG99605	Soybean	cytosol	4.84	15.19
KRG94685	Soybean	nucleus	12.7	14.79
KRH06841	Soybean	nucleus	13.31	14.67

Protein Annotations

EntrezGene:100807261	MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02005275	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G286500
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:K7L9I6	EnsemblPlants:KRH45665	ProteinID:KRH45665	ProteinID:KRH45665.1	InterPro:MYC/MYB_N
PFAM:PF00010	PFAM:PF14215	PFscan:PS50888	PANTHER:PTHR31945	PANTHER:PTHR31945:SF14	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000233853C	InterPro:bHLH_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:39636847..39640434

Molecular Weight (calculated)

55651.4 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.582

Length

496 amino acids

Sequence
(BLAST)

001: MSGLGVVECL RPLVKTNAWD YVVVWKYGDD PTRFIEWVGC CCRGSCSVNI DVVKPEEEKG EVCNLAQSCR DDHFHFQHLV RTKACEALAQ LPFALSLYSG
101: VHGEVAISQQ ARWLTQDSIG TQVLIPIVGG LIELFTENLI PMDMNIIEFI TAHGCVSLEQ EAISAQSYTS LNINEHLPLR EQYSHWSPHM PTLTPSVHQP
201: ATRQCSSHPS IEGPSSGSNP STEEPSFDSK FASLIPHEYL KPPVKKSPIP KTETPKYNKT SGKWQRGLSS HCSNEEDDES KSVKESQKEV YQAKNLVTER
301: NRRNKIKKGL FTLRSLVPRI TKMDRAAILA DAVDHIKELQ TQVRELKDEV RDLEEQECEK NTPQLMITKG KKPEGTRSNP PLNQSSSGCT KKMQMEVQVE
401: VHHISKTDFL IKLCSEQTQG GFSKLMEAIH SIGLKVDSAN MTTLDGKVLN ILTAKANKQD IHPTKLKEYL IQKTSDDRQS SKQVRENGGD MKSSRK

Best Arabidopsis Sequence Match ( AT2G16910.1 )
(BLAST)

001: MESNMQNLLE KLRPLVGARA WDYCVLWRLN EDQRFVKWMG CCCGGTELIA ENGTEEFSYG GCRDVMFHHP RTKSCEFLSH LPASIPLDSG IYAETLLTNQ
101: TGWLSESSEP SFMQETICTR VLIPIPGGLV ELFATRHVAE DQNVVDFVMG HCNMLMDDSV TINMMVADEV ESKPYGMLSG DIQQKGSKEE DMMNLPSSYD
201: ISADQIRLNF LPQMSDYETQ HLKMKSDYHH QALGYLPENG NKEMMGMNPF NTVEEDGIPV IGEPSLLVNE QQVVNDKDMN ENGRVDSGSD CSDQIDDEDD
301: PKYKKKSGKG SQAKNLMAER RRRKKLNDRL YALRSLVPRI TKLDRASILG DAINYVKELQ NEAKELQDEL EENSETEDGS NRPQGGMSLN GTVVTGFHPG
401: LSCNSNVPSV KQDVDLENSN DKGQEMEPQV DVAQLDGREF FVKVICEYKP GGFTRLMEAL DSLGLEVTNA NTTRYLSLVS NVFKVEKNDN EMVQAEHVRN
501: SLLEITRNTS RGWQDDQMAT GSMQNEKNEV DYQHYDDHQH HNGHHHPFDH QMNQSAHHHH HHQHINHYHN Q

Arabidopsis Description

AMSTranscription factor ABORTED MICROSPORES [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.