Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37338 | Soybean | nucleus | 69.26 | 65.57 |
| KRH12334 | Soybean | nucleus | 67.53 | 64.2 |
| VIT_11s0052g00100.t01 | Wine grape | nucleus | 64.94 | 61.48 |
| KRH02772 | Soybean | nucleus | 83.98 | 57.06 |
| PGSC0003DMT400010463 | Potato | nucleus | 59.74 | 54.76 |
| Solyc07g018010.2.1 | Tomato | nucleus | 59.31 | 54.15 |
| CDY47924 | Canola | nucleus | 52.81 | 49.59 |
| Bra002756.1-P | Field mustard | nucleus | 52.38 | 49.19 |
| CDY38270 | Canola | nucleus | 52.38 | 49.19 |
| Bra020462.1-P | Field mustard | nucleus | 52.38 | 49.19 |
| CDY42237 | Canola | nucleus | 51.52 | 49.17 |
| Bra006831.1-P | Field mustard | nucleus | 51.95 | 48.78 |
| CDX88610 | Canola | nucleus | 51.95 | 48.78 |
| PGSC0003DMT400044959 | Potato | nucleus | 47.62 | 47.62 |
| CDY11882 | Canola | nucleus | 49.78 | 46.75 |
| AT5G57150.4 | Thale cress | nucleus | 52.81 | 46.21 |
| Solyc05g014590.2.1 | Tomato | nucleus | 45.02 | 45.02 |
| CDY52738 | Canola | cytosol | 31.6 | 44.24 |
| GSMUA_Achr6P30900_001 | Banana | nucleus | 39.83 | 43.81 |
| GSMUA_Achr7P16000_001 | Banana | nucleus | 47.19 | 41.92 |
| TraesCS2A01G271700.1 | Wheat | nucleus | 46.32 | 38.49 |
| TraesCS2B01G289900.1 | Wheat | nucleus | 45.89 | 38.13 |
| TraesCS2D01G270300.1 | Wheat | nucleus | 45.89 | 38.13 |
| TraesCS2D01G270000.2 | Wheat | nucleus | 42.42 | 36.57 |
| HORVU2Hr1G066100.1 | Barley | cytosol, nucleus | 47.19 | 35.74 |
| Zm00001d025141_P003 | Maize | nucleus | 40.26 | 35.5 |
| TraesCS2B01G289700.2 | Wheat | nucleus | 41.99 | 35.4 |
| Zm00001d024522_P001 | Maize | nucleus | 38.96 | 34.88 |
| EES14602 | Sorghum | nucleus | 42.42 | 34.03 |
| TraesCS5A01G533900.1 | Wheat | nucleus | 34.63 | 33.9 |
| TraesCSU01G138400.2 | Wheat | nucleus | 36.36 | 33.47 |
| Os04t0301500-01 | Rice | nucleus | 44.59 | 33.23 |
| TraesCS3B01G018400.1 | Wheat | nucleus | 37.66 | 32.83 |
| TraesCSU01G138900.1 | Wheat | nucleus | 35.93 | 32.3 |
| TraesCS4B01G364800.1 | Wheat | nucleus | 35.06 | 31.64 |
| HORVU4Hr1G087590.1 | Barley | nucleus | 35.06 | 31.52 |
| HORVU2Hr1G066090.2 | Barley | cytosol | 20.78 | 31.37 |
| TraesCS5A01G533200.1 | Wheat | nucleus | 33.77 | 30.47 |
| TraesCS3A01G028200.3 | Wheat | nucleus | 35.06 | 29.89 |
| Zm00001d004095_P001 | Maize | nucleus | 39.39 | 29.64 |
| HORVU4Hr1G087610.1 | Barley | nucleus | 32.03 | 29.48 |
| Os04t0300600-00 | Rice | cytosol | 36.8 | 28.81 |
| GSMUA_Achr4P12700_001 | Banana | nucleus | 36.8 | 28.81 |
| KRH41065 | Soybean | nucleus | 17.32 | 28.78 |
| TraesCS3A01G442600.1 | Wheat | nucleus | 35.06 | 27.74 |
| HORVU2Hr1G066000.7 | Barley | nucleus | 32.03 | 27.01 |
| TraesCS3D01G435200.1 | Wheat | nucleus | 36.8 | 26.9 |
| EES05013 | Sorghum | nucleus | 32.47 | 26.6 |
| HORVU3Hr1G005500.3 | Barley | cytosol, nucleus | 36.8 | 26.23 |
| KRH73107 | Soybean | mitochondrion, nucleus | 17.32 | 24.54 |
| TraesCS3D01G017700.1 | Wheat | nucleus | 38.1 | 23.66 |
| KRH25108 | Soybean | nucleus | 23.81 | 19.3 |
| KRH30560 | Soybean | nucleus | 24.24 | 17.95 |
| KRH26533 | Soybean | nucleus | 22.94 | 16.46 |
| KRH22827 | Soybean | nucleus | 22.94 | 16.41 |
| KRH62159 | Soybean | nucleus | 23.38 | 16.36 |
| KRH52870 | Soybean | nucleus | 22.94 | 16.01 |
| KRH16156 | Soybean | nucleus | 18.61 | 15.81 |
| KRH16909 | Soybean | nucleus | 22.94 | 15.77 |
| KRH39520 | Soybean | nucleus | 22.51 | 15.62 |
| KRH74438 | Soybean | nucleus | 22.51 | 15.57 |
| KRH72519 | Soybean | nucleus | 21.64 | 15.02 |
| KRH45479 | Soybean | nucleus | 18.61 | 13.44 |
| KRG99605 | Soybean | cytosol | 9.09 | 13.29 |
| KRH08406 | Soybean | nucleus | 24.68 | 12.84 |
| KRG94685 | Soybean | nucleus | 23.38 | 12.68 |
| KRH06841 | Soybean | nucleus | 22.94 | 11.78 |
| KRH45665 | Soybean | nucleus | 24.68 | 11.49 |
| KRG90676 | Soybean | extracellular, vacuole | 28.57 | 11.44 |
| KRH36073 | Soybean | nucleus | 28.14 | 11.38 |
| KRH54112 | Soybean | nucleus | 22.51 | 11.26 |
| KRH63854 | Soybean | nucleus | 22.51 | 11.18 |
| KRH59747 | Soybean | nucleus | 23.38 | 11.18 |
Protein Annotations
| EntrezGene:100803326 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02008170 | ncoils:Coil | EnsemblPlantsGene:GLYMA_13G101100 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7LWS6 | EnsemblPlants:KRH19109 | ProteinID:KRH19109 | ProteinID:KRH19109.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF26 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000294E5AF |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:21624113..21626203
Molecular Weight (calculated)
26387.7 Da
IEP (calculated)
6.799
GRAVY (calculated)
-0.361
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MENIGEDQYG YLPETDLFFP NEDLGSWAIM DGEAVSWYYD SSSPDGTGAS SSVASKNIVS ERNRRKKLND RLLALRAVVP NITKMDKASI IKDAIEYIQH
101: LHEQEKRIQA EILDLESRNK FKNPTYEFDQ DLPILLRSKK KKTEHLFDSL SSRNSPSIEI IELRVTYMRE KTFVVNLTCS KRTDTMVKLC EVFESLKLKV
201: IAANITSFSG TLLKKTAFIE VSLPPILPFL N
101: LHEQEKRIQA EILDLESRNK FKNPTYEFDQ DLPILLRSKK KKTEHLFDSL SSRNSPSIEI IELRVTYMRE KTFVVNLTCS KRTDTMVKLC EVFESLKLKV
201: IAANITSFSG TLLKKTAFIE VSLPPILPFL N
001: MEDIVDQELS NYWEPSSFLQ NEDFEYDRSW PLEEAISGSY DSSSPDGAAS SPASKNIVSE RNRRQKLNQR LFALRSVVPN ITKMDKASII KDAISYIEGL
101: QYEEKKLEAE IRELESTPKS SLSFSKDFDR DLLVPVTSKK MKQLDSGSST SLIEVLELKV TFMGERTMVV SVTCNKRTDT MVKLCEVFES LNLKILTSNL
201: TSFSGMIFHT VFIEVSIFLS LSLLSL
101: QYEEKKLEAE IRELESTPKS SLSFSKDFDR DLLVPVTSKK MKQLDSGSST SLIEVLELKV TFMGERTMVV SVTCNKRTDT MVKLCEVFES LNLKILTSNL
201: TSFSGMIFHT VFIEVSIFLS LSLLSL
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAJ5]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.