Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19109 | Soybean | nucleus | 57.06 | 83.98 |
| KRH37338 | Soybean | nucleus | 56.18 | 78.28 |
| KRH12334 | Soybean | nucleus | 54.41 | 76.13 |
| VIT_11s0052g00100.t01 | Wine grape | nucleus | 52.06 | 72.54 |
| PGSC0003DMT400010463 | Potato | nucleus | 46.47 | 62.7 |
| Solyc07g018010.2.1 | Tomato | nucleus | 46.18 | 62.06 |
| CDY47924 | Canola | nucleus | 40.0 | 55.28 |
| Bra020462.1-P | Field mustard | nucleus | 39.71 | 54.88 |
| CDY42237 | Canola | nucleus | 38.82 | 54.55 |
| Bra002756.1-P | Field mustard | nucleus | 39.41 | 54.47 |
| CDY38270 | Canola | nucleus | 39.41 | 54.47 |
| CDX88610 | Canola | nucleus | 39.41 | 54.47 |
| Bra006831.1-P | Field mustard | nucleus | 39.41 | 54.47 |
| CDY11882 | Canola | nucleus | 38.82 | 53.66 |
| PGSC0003DMT400044959 | Potato | nucleus | 35.88 | 52.81 |
| CDY52738 | Canola | cytosol | 25.0 | 51.52 |
| Solyc05g014590.2.1 | Tomato | nucleus | 34.71 | 51.08 |
| GSMUA_Achr6P30900_001 | Banana | nucleus | 30.0 | 48.57 |
| AT5G57150.4 | Thale cress | nucleus | 37.35 | 48.11 |
| GSMUA_Achr7P16000_001 | Banana | nucleus | 35.29 | 46.15 |
| TraesCS2A01G271700.1 | Wheat | nucleus | 34.12 | 41.73 |
| TraesCS2D01G270300.1 | Wheat | nucleus | 33.82 | 41.37 |
| TraesCS2B01G289900.1 | Wheat | nucleus | 33.82 | 41.37 |
| HORVU2Hr1G066100.1 | Barley | cytosol, nucleus | 36.47 | 40.66 |
| Zm00001d025141_P003 | Maize | nucleus | 30.59 | 39.69 |
| Zm00001d024522_P001 | Maize | nucleus | 29.41 | 38.76 |
| TraesCS2D01G270000.2 | Wheat | nucleus | 30.29 | 38.43 |
| EES14602 | Sorghum | nucleus | 31.76 | 37.5 |
| HORVU2Hr1G066090.2 | Barley | cytosol | 16.76 | 37.25 |
| TraesCS2B01G289700.2 | Wheat | nucleus | 29.71 | 36.86 |
| TraesCS3B01G018400.1 | Wheat | nucleus | 27.94 | 35.85 |
| Os04t0301500-01 | Rice | nucleus | 32.65 | 35.81 |
| TraesCSU01G138900.1 | Wheat | nucleus | 26.47 | 35.02 |
| TraesCS5A01G533900.1 | Wheat | nucleus | 24.12 | 34.75 |
| TraesCSU01G138400.2 | Wheat | nucleus | 25.59 | 34.66 |
| TraesCS4B01G364800.1 | Wheat | nucleus | 25.88 | 34.38 |
| TraesCS5A01G533200.1 | Wheat | nucleus | 25.29 | 33.59 |
| TraesCS3A01G028200.3 | Wheat | nucleus | 26.47 | 33.21 |
| HORVU4Hr1G087590.1 | Barley | nucleus | 25.0 | 33.07 |
| GSMUA_Achr4P12700_001 | Banana | nucleus | 28.24 | 32.54 |
| Zm00001d004095_P001 | Maize | nucleus | 28.82 | 31.92 |
| EES05013 | Sorghum | nucleus | 26.47 | 31.91 |
| HORVU4Hr1G087610.1 | Barley | nucleus | 22.94 | 31.08 |
| Os04t0300600-00 | Rice | cytosol | 26.18 | 30.17 |
| TraesCS3A01G442600.1 | Wheat | nucleus | 25.88 | 30.14 |
| TraesCS3D01G435200.1 | Wheat | nucleus | 27.65 | 29.75 |
| TraesCS3D01G017700.1 | Wheat | nucleus | 32.06 | 29.3 |
| KRH41065 | Soybean | nucleus | 11.76 | 28.78 |
| KRH73107 | Soybean | mitochondrion, nucleus | 13.24 | 27.61 |
| HORVU3Hr1G005500.3 | Barley | cytosol, nucleus | 26.18 | 27.47 |
| HORVU2Hr1G066000.7 | Barley | nucleus | 22.06 | 27.37 |
| KRH25108 | Soybean | nucleus | 16.47 | 19.65 |
| KRH30560 | Soybean | nucleus | 17.65 | 19.23 |
| KRH26533 | Soybean | nucleus | 17.06 | 18.01 |
| KRH16909 | Soybean | nucleus | 17.65 | 17.86 |
| KRH22827 | Soybean | nucleus | 16.76 | 17.65 |
| KRH39520 | Soybean | nucleus | 17.06 | 17.42 |
| KRH16156 | Soybean | nucleus | 13.82 | 17.28 |
| KRH62159 | Soybean | nucleus | 16.76 | 17.27 |
| KRH72519 | Soybean | nucleus | 16.76 | 17.12 |
| KRH74438 | Soybean | nucleus | 16.76 | 17.07 |
| KRH52870 | Soybean | nucleus | 16.47 | 16.92 |
| KRH45479 | Soybean | nucleus | 14.71 | 15.62 |
| KRG99605 | Soybean | cytosol | 7.06 | 15.19 |
| KRH08406 | Soybean | nucleus | 18.53 | 14.19 |
| KRG94685 | Soybean | nucleus | 17.06 | 13.62 |
| KRH06841 | Soybean | nucleus | 17.06 | 12.89 |
| KRH54112 | Soybean | nucleus | 17.35 | 12.77 |
| KRH63854 | Soybean | nucleus | 17.35 | 12.69 |
| KRH59747 | Soybean | nucleus | 17.94 | 12.63 |
| KRG90676 | Soybean | extracellular, vacuole | 21.18 | 12.48 |
| KRH45665 | Soybean | nucleus | 17.65 | 12.1 |
| KRH36073 | Soybean | nucleus | 19.12 | 11.38 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02010323 | EnsemblPlantsGene:GLYMA_17G058600 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1MSK8 | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlants:KRH02772 | ProteinID:KRH02772 | ProteinID:KRH02772.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR31945 |
| PANTHER:PTHR31945:SF26 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002961388 | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:4458699..4465376
Molecular Weight (calculated)
39021.6 Da
IEP (calculated)
7.323
GRAVY (calculated)
-0.551
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVSRKQQIK HRKQRERERE SMTDEQQHQF PSSMVSSPLY IHIYHAEVEN KSEENRPKIE RKRNTKTLAH HILYSLTWIV NSANELLPFK LTMENIGEEY
101: GYWPENDMLF QNEDLGSWAI MDEAALSGSG YYDSSSPDGT GASSSVASKN IVSERNRRKK LNDRLFALRA VVPNITKMDK ASIIKDAIEY IQHLHDQEKR
201: IQAEILDLES GNKLKNPTYE FDQDLPILLR SKKKRTEQLF GSVSSRNSPI EIIDLRVTYM GEKTFVVSLT CSKRTDTMVK LCAVFESLKL KVITANITSF
301: SGTLLKTVFI QADEEERDFL HIKIQTAISA LNDPLSPMSI
101: GYWPENDMLF QNEDLGSWAI MDEAALSGSG YYDSSSPDGT GASSSVASKN IVSERNRRKK LNDRLFALRA VVPNITKMDK ASIIKDAIEY IQHLHDQEKR
201: IQAEILDLES GNKLKNPTYE FDQDLPILLR SKKKRTEQLF GSVSSRNSPI EIIDLRVTYM GEKTFVVSLT CSKRTDTMVK LCAVFESLKL KVITANITSF
301: SGTLLKTVFI QADEEERDFL HIKIQTAISA LNDPLSPMSI
001: MEDIVDQELS NYWEPSSFLQ NEDFEYDSWP LEEAISGSYD SSSPDGAASS PASKNIVSER NRRQKLNQRL FALRSVVPNI TKMDKASIIK DAISYIEGLQ
101: YEEKKLEAEI RELESTPKSS LSFSKDFDRD LLVPVTSKKM KQLDSGSSTS LIEVLELKVT FMGERTMVVS VTCNKRTDTM VKLCEVFESL NLKILTSNLT
201: SFSGMIFHTV FIEADEEEQE VLRLKIETGI GAYNETQSPT LSIDSLY
101: YEEKKLEAEI RELESTPKSS LSFSKDFDRD LLVPVTSKKM KQLDSGSSTS LIEVLELKVT FMGERTMVVS VTCNKRTDTM VKLCEVFESL NLKILTSNLT
201: SFSGMIFHTV FIEADEEEQE VLRLKIETGI GAYNETQSPT LSIDSLY
Arabidopsis Description
Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.