Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011972.1-P | Field mustard | nucleus | 97.15 | 97.15 |
| CDX71377 | Canola | nucleus | 95.89 | 95.89 |
| AT2G28160.1 | Thale cress | nucleus | 88.92 | 88.36 |
| CDX77160 | Canola | nucleus | 84.18 | 84.18 |
| CDY30505 | Canola | nucleus | 83.54 | 84.08 |
| CDY31199 | Canola | nucleus | 82.59 | 83.39 |
| CDX83286 | Canola | nucleus | 81.96 | 82.75 |
| KRH22827 | Soybean | nucleus | 53.48 | 52.32 |
| VIT_06s0061g00720.t01 | Wine grape | nucleus | 50.0 | 50.32 |
| KRH26533 | Soybean | nucleus | 50.0 | 49.07 |
| KRH25108 | Soybean | nucleus | 43.99 | 48.77 |
| KRH30560 | Soybean | nucleus | 46.84 | 47.44 |
| Solyc06g051550.2.1 | Tomato | cytosol | 44.62 | 46.38 |
| PGSC0003DMT400048941 | Potato | nucleus | 45.25 | 45.83 |
| GSMUA_Achr6P27600_001 | Banana | nucleus | 30.7 | 31.91 |
| HORVU2Hr1G068960.2 | Barley | nucleus | 28.48 | 29.41 |
| TraesCS2A01G281200.1 | Wheat | nucleus | 31.33 | 29.29 |
| TraesCS2D01G280100.1 | Wheat | nucleus | 31.01 | 28.91 |
| TraesCS2B01G298600.1 | Wheat | nucleus | 31.33 | 28.86 |
| Zm00001d004007_P001 | Maize | nucleus | 30.7 | 27.09 |
| KXG26070 | Sorghum | nucleus | 31.33 | 27.05 |
| Os04t0381700-00 | Rice | nucleus | 30.06 | 26.99 |
| CDY43542 | Canola | nucleus | 21.2 | 25.48 |
| Zm00001d025205_P001 | Maize | nucleus | 30.7 | 25.46 |
| CDX98033 | Canola | nucleus | 14.87 | 25.41 |
| CDY19416 | Canola | nucleus | 14.56 | 24.86 |
| CDY42237 | Canola | nucleus | 18.99 | 24.79 |
| CDX68608 | Canola | nucleus | 20.57 | 24.71 |
| CDY46719 | Canola | nucleus | 20.57 | 24.62 |
| CDY30182 | Canola | nucleus | 18.99 | 24.59 |
| CDY38270 | Canola | nucleus | 18.99 | 24.39 |
| CDY47924 | Canola | nucleus | 18.99 | 24.39 |
| CDX88610 | Canola | nucleus | 18.35 | 23.58 |
| CDY11882 | Canola | nucleus | 18.04 | 23.17 |
| CDY52738 | Canola | cytosol | 12.03 | 23.03 |
| CDY03557 | Canola | cytosol, nucleus, plastid | 9.18 | 18.35 |
| CDX97027 | Canola | nucleus | 17.09 | 18.12 |
| CDX69821 | Canola | nucleus | 17.09 | 17.82 |
| CDY69978 | Canola | nucleus | 18.35 | 16.2 |
| CDY37835 | Canola | nucleus | 18.04 | 15.92 |
| CDY08769 | Canola | nucleus | 17.09 | 15.04 |
| CDX97028 | Canola | cytosol, plastid, vacuole | 4.75 | 15.0 |
| CDX99537 | Canola | endoplasmic reticulum, golgi, mitochondrion, plastid | 9.49 | 14.85 |
| CDY54227 | Canola | nucleus | 17.09 | 14.21 |
| CDY34878 | Canola | cytosol | 16.46 | 13.54 |
| CDY21073 | Canola | nucleus | 18.04 | 13.23 |
| CDY28529 | Canola | nucleus | 18.35 | 13.21 |
| CDX93399 | Canola | nucleus | 17.09 | 13.17 |
| CDY34601 | Canola | nucleus | 18.04 | 12.84 |
| CDY37964 | Canola | nucleus | 16.46 | 12.81 |
| CDY31399 | Canola | nucleus | 22.15 | 12.35 |
| CDX71316 | Canola | nucleus | 22.15 | 12.32 |
| CDY02227 | Canola | nucleus | 21.52 | 11.97 |
| CDX89760 | Canola | nucleus | 21.52 | 11.97 |
| CDY48974 | Canola | nucleus | 18.04 | 11.9 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.5 | Gene3D:4.10.280.10 | GO:A0A078EY80 | EnsemblPlants:CDY04543 | ProteinID:CDY04543 |
| ProteinID:CDY04543.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00118718001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR31945 | PANTHER:PTHR31945:SF17 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EF28D7 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g13690D
Coordinates
chrLK031955:+:569181..571004
Molecular Weight (calculated)
35161.2 Da
IEP (calculated)
4.602
GRAVY (calculated)
-0.502
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGRVIALTN LNDLELHNFL VDPNFDQFIN LIRGDDQTIE NPPLDFDLGG PLHNSPCFID DNQFIPTPVD DLFDELPDID SNVAESFRSF EGESVVRASG
101: EDDSNDGDDS SATTTNNDGS RKKKTDRSRT LISERKRRGR MKDKLYALRS LVPNITKMDK ASIVGDAVAY VQELQSQAKK LKADIAGLEA SLTSTGGYQE
201: PTPVAQKSHT FRSINPPVSK KINQMDVIQV EEKEFYVRLV CNKGEGVAAS LYKSLESLTS FQVQNSNLSS PSPDTYLLTY TLDGTCFEQS LNMPNLKLWI
301: TGSLLNQGFE FIKPFT
101: EDDSNDGDDS SATTTNNDGS RKKKTDRSRT LISERKRRGR MKDKLYALRS LVPNITKMDK ASIVGDAVAY VQELQSQAKK LKADIAGLEA SLTSTGGYQE
201: PTPVAQKSHT FRSINPPVSK KINQMDVIQV EEKEFYVRLV CNKGEGVAAS LYKSLESLTS FQVQNSNLSS PSPDTYLLTY TLDGTCFEQS LNMPNLKLWI
301: TGSLLNQGFE FIKPFT
001: MEGRVNALSN INDLELHNFL VDPNFDQFIN LIRGDHQTID ENPVLDFDLG PLQNSPCFID ENQFIPTPVD DLFDELPDLD SNVAESFRSF DGDSVRAGGE
101: EDEEDYNDGD DSSATTTNND GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA KKLKSDIAGL EASLNSTGGY
201: QEHAPDAQKT QPFRGINPPA SKKIIQMDVI QVEEKGFYVR LVCNKGEGVA PSLYKSLESL TSFQVQNSNL SSPSPDTYLL TYTLDGTCFE QSLNLPNLKL
301: WITGSLLNQG FEFIKSFT
101: EDEEDYNDGD DSSATTTNND GTRKTKTDRS RTLISERRRR GRMKDKLYAL RSLVPNITKM DKASIVGDAV LYVQELQSQA KKLKSDIAGL EASLNSTGGY
201: QEHAPDAQKT QPFRGINPPA SKKIIQMDVI QVEEKGFYVR LVCNKGEGVA PSLYKSLESL TSFQVQNSNL SSPSPDTYLL TYTLDGTCFE QSLNLPNLKL
301: WITGSLLNQG FEFIKSFT
Arabidopsis Description
FITTranscription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Source:UniProtKB/Swiss-Prot;Acc:Q0V7X4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.