Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014653.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY68089 | Canola | nucleus | 65.18 | 58.17 |
| CDY69684 | Canola | nucleus | 64.73 | 57.77 |
| CDY47392 | Canola | nucleus | 58.48 | 51.17 |
| CDX76025 | Canola | nucleus | 58.48 | 51.17 |
| CDY47394 | Canola | nucleus | 57.14 | 50.2 |
| CDX76026 | Canola | nucleus | 55.36 | 50.0 |
| CDX76031 | Canola | nucleus | 54.91 | 49.0 |
| AT3G56980.1 | Thale cress | nucleus | 55.36 | 48.06 |
| CDX77489 | Canola | cytosol, nucleus, plastid | 50.89 | 46.34 |
| CDX85121 | Canola | nucleus | 50.45 | 45.94 |
| CDX72086 | Canola | nucleus | 48.21 | 45.76 |
| CDY71388 | Canola | cytosol | 50.89 | 45.42 |
| CDY06148 | Canola | nucleus | 50.0 | 44.98 |
| CDY47395 | Canola | nucleus | 44.2 | 44.8 |
| CDX67670 | Canola | nucleus | 49.55 | 44.58 |
| CDY06149 | Canola | nucleus | 49.55 | 44.58 |
| CDX72085 | Canola | nucleus | 49.11 | 43.82 |
| CDX67671 | Canola | nucleus | 48.66 | 43.78 |
| CDY47396 | Canola | mitochondrion | 57.59 | 43.73 |
| CDX76027 | Canola | nucleus | 44.2 | 43.04 |
| CDY23861 | Canola | cytosol, plastid | 26.79 | 42.86 |
| CDY71118 | Canola | nucleus | 47.32 | 42.74 |
| CDY06147 | Canola | nucleus | 47.32 | 42.23 |
| CDX77490 | Canola | nucleus | 46.43 | 41.94 |
| CDX97997 | Canola | nucleus | 42.41 | 39.09 |
| CDY72354 | Canola | nucleus | 42.41 | 39.09 |
| CDY06938 | Canola | nucleus | 40.62 | 38.24 |
| CDY14758 | Canola | nucleus | 40.18 | 37.82 |
| VIT_13s0047g00450.t01 | Wine grape | nucleus | 31.7 | 31.56 |
| KRG95137 | Soybean | cytosol, nucleus, plastid | 16.07 | 30.77 |
| VIT_08s0007g05300.t01 | Wine grape | nucleus | 33.48 | 30.61 |
| PGSC0003DMT400076759 | Potato | nucleus | 23.66 | 29.44 |
| VIT_13s0073g00400.t01 | Wine grape | extracellular, golgi, nucleus | 30.8 | 28.63 |
| Solyc10g079680.1.1 | Tomato | nucleus | 24.11 | 27.98 |
| KRH66814 | Soybean | nucleus | 29.91 | 27.8 |
| PGSC0003DMT400076775 | Potato | cytosol | 12.5 | 26.67 |
| KRH66812 | Soybean | cytosol, nucleus, plastid | 28.57 | 26.56 |
| GSMUA_Achr8P22120_001 | Banana | nucleus | 27.23 | 25.42 |
| Zm00001d042062_P001 | Maize | nucleus | 25.0 | 25.23 |
| HORVU2Hr1G114070.1 | Barley | nucleus | 28.12 | 24.9 |
| Solyc10g079650.1.1 | Tomato | nucleus | 27.68 | 24.8 |
| TraesCS2B01G543800.1 | Wheat | nucleus | 27.68 | 24.8 |
| TraesCS2B01G543700.1 | Wheat | nucleus | 26.79 | 24.59 |
| TraesCS2A01G515300.1 | Wheat | nucleus | 27.23 | 24.11 |
| TraesCS7B01G321400.1 | Wheat | nucleus | 26.79 | 24.1 |
| TraesCS3D01G495400.1 | Wheat | nucleus | 25.45 | 23.95 |
| TraesCS3B01G549700.1 | Wheat | nucleus | 22.32 | 23.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.34 | 23.89 |
| TraesCS2D01G517000.1 | Wheat | nucleus | 26.79 | 23.72 |
| TraesCS7A01G421000.1 | Wheat | nucleus | 26.79 | 23.62 |
| TraesCS3B01G549800.1 | Wheat | nucleus | 25.0 | 23.53 |
| Zm00001d011847_P001 | Maize | nucleus | 23.21 | 22.71 |
| TraesCS3A01G489500.1 | Wheat | nucleus | 24.11 | 22.69 |
| HORVU3Hr1G108670.2 | Barley | nucleus | 24.11 | 22.5 |
| TraesCS3D01G495700.1 | Wheat | nucleus | 24.55 | 22.27 |
| Os01t0952800-01 | Rice | nucleus | 24.55 | 22.27 |
| TraesCS3B01G550200.2 | Wheat | nucleus | 24.55 | 22.27 |
| TraesCS3A01G489700.1 | Wheat | nucleus | 24.55 | 22.27 |
| TraesCS3D01G495300.1 | Wheat | nucleus | 23.21 | 22.22 |
| TraesCS3A01G489400.1 | Wheat | nucleus | 22.77 | 21.98 |
| HORVU3Hr1G108660.1 | Barley | nucleus | 22.77 | 21.98 |
| HORVU3Hr1G108680.1 | Barley | nucleus | 23.66 | 21.54 |
| KXG34133 | Sorghum | nucleus | 22.77 | 20.9 |
| TraesCS3D01G495600.1 | Wheat | nucleus | 21.88 | 20.0 |
| TraesCS3A01G489600.1 | Wheat | nucleus | 21.43 | 19.59 |
| TraesCS3B01G550000.1 | Wheat | nucleus | 20.98 | 19.18 |
| CDX80905 | Canola | nucleus | 27.23 | 15.68 |
| Solyc10g079660.1.1 | Tomato | nucleus | 29.91 | 9.61 |
| CDX76023 | Canola | cytosol | 0.89 | 7.14 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078CH30 | EnsemblPlants:CDX76032 | ProteinID:CDX76032 | ProteinID:CDX76032.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00126258001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MASH1/Ascl1a-like |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR13935 | PANTHER:PTHR13935:SF41 | SUPFAM:SSF47459 | SignalP:SignalP-noTM |
| UniParc:UPI00025445A1 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaA04g02960D
Coordinates
chrLK031806:-:303788..305440
Molecular Weight (calculated)
25292.1 Da
IEP (calculated)
7.659
GRAVY (calculated)
-0.375
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSLLFILSS TMAPVESTRI TTVDRRAREN LDDFTFLDFP ALETYGMEHQ EIQEILGVSV PSEGNGVVTK KLNHNASERD RHKKIKSLFS SLRSCLPASD
101: PVKEAKYSSD GFSELEYIPE LQEEVKKLIK KKELLVRVSG QRAIEHYVEP QPKTDVARYV STISATKLGD NEVMVQISSS KIHNFSISNV LSGLEEDGFC
201: SYGYFIFKVS RRKTLLHFAS SNGK
101: PVKEAKYSSD GFSELEYIPE LQEEVKKLIK KKELLVRVSG QRAIEHYVEP QPKTDVARYV STISATKLGD NEVMVQISSS KIHNFSISNV LSGLEEDGFC
201: SYGYFIFKVS RRKTLLHFAS SNGK
001: MCALVPSFFT NFGWPSTNQY ESYYGAGDNL NNGTFLELTV PQTYEVTHHQ NSLGVSVSSE GNEIDNNPVV VKKLNHNASE RDRRKKINTL FSSLRSCLPA
101: SDQSKKLSIP ETVSKSLKYI PELQQQVKRL IQKKEEILVR VSGQRDFELY DKQQPKAVAS YLSTVSATRL GDNEVMVQVS SSKIHNFSIS NVLGGIEEDG
201: FVLVDVSSSR SQGERLFYTL HLQVENMDDY KINCEELSER MLYLYEKCEN SFN
101: SDQSKKLSIP ETVSKSLKYI PELQQQVKRL IQKKEEILVR VSGQRDFELY DKQQPKAVAS YLSTVSATRL GDNEVMVQVS SSKIHNFSIS NVLGGIEEDG
201: FVLVDVSSSR SQGERLFYTL HLQVENMDDY KINCEELSER MLYLYEKCEN SFN
Arabidopsis Description
ORG2Transcription factor ORG2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.