Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47394 | Canola | nucleus | 89.29 | 9.8 |
| CDX76025 | Canola | nucleus | 89.29 | 9.77 |
| CDY47392 | Canola | nucleus | 89.29 | 9.77 |
| CDX76027 | Canola | nucleus | 71.43 | 8.7 |
| CDX76031 | Canola | nucleus | 71.43 | 7.97 |
| CDY68089 | Canola | nucleus | 71.43 | 7.97 |
| CDY47395 | Canola | nucleus | 60.71 | 7.69 |
| CDX67670 | Canola | nucleus | 67.86 | 7.63 |
| CDX72086 | Canola | nucleus | 64.29 | 7.63 |
| CDY69684 | Canola | nucleus | 67.86 | 7.57 |
| CDX76026 | Canola | nucleus | 64.29 | 7.26 |
| CDX67671 | Canola | nucleus | 64.29 | 7.23 |
| CDY06148 | Canola | nucleus | 64.29 | 7.23 |
| CDY47396 | Canola | mitochondrion | 75.0 | 7.12 |
| CDY71118 | Canola | nucleus | 60.71 | 6.85 |
| CDY06149 | Canola | nucleus | 60.71 | 6.83 |
| CDY71388 | Canola | cytosol | 60.71 | 6.77 |
| CDX85121 | Canola | nucleus | 57.14 | 6.5 |
| CDX77489 | Canola | cytosol, nucleus, plastid | 57.14 | 6.5 |
| CDX77490 | Canola | nucleus | 57.14 | 6.45 |
| CDY06147 | Canola | nucleus | 57.14 | 6.37 |
| CDX72085 | Canola | nucleus | 53.57 | 5.98 |
| CDX97997 | Canola | nucleus | 46.43 | 5.35 |
| CDY72354 | Canola | nucleus | 46.43 | 5.35 |
| CDY14758 | Canola | nucleus | 42.86 | 5.04 |
| CDY06938 | Canola | nucleus | 42.86 | 5.04 |
| KRH66814 | Soybean | nucleus | 17.86 | 2.07 |
| KRH66812 | Soybean | cytosol, nucleus, plastid | 17.86 | 2.07 |
| VIT_08s0007g05300.t01 | Wine grape | nucleus | 17.86 | 2.04 |
| Solyc10g079680.1.1 | Tomato | nucleus | 10.71 | 1.55 |
| CDY23861 | Canola | cytosol, plastid | 7.14 | 1.43 |
| PGSC0003DMT400076759 | Potato | nucleus | 7.14 | 1.11 |
| CDX76032 | Canola | cytosol | 7.14 | 0.89 |
| GSMUA_Achr8P22120_001 | Banana | nucleus | 7.14 | 0.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 7.14 | 0.81 |
| TraesCS2A01G515300.1 | Wheat | nucleus | 7.14 | 0.79 |
| Solyc10g079660.1.1 | Tomato | nucleus | 17.86 | 0.72 |
| VIT_13s0047g00450.t01 | Wine grape | nucleus | 3.57 | 0.44 |
| VIT_13s0073g00400.t01 | Wine grape | extracellular, golgi, nucleus | 3.57 | 0.41 |
| KXG34133 | Sorghum | nucleus | 3.57 | 0.41 |
| TraesCS2B01G543700.1 | Wheat | nucleus | 3.57 | 0.41 |
| TraesCS3D01G495600.1 | Wheat | nucleus | 3.57 | 0.41 |
| TraesCS3B01G550000.1 | Wheat | nucleus | 3.57 | 0.41 |
| TraesCS3A01G489600.1 | Wheat | nucleus | 3.57 | 0.41 |
| HORVU3Hr1G108680.1 | Barley | nucleus | 3.57 | 0.41 |
| Os01t0952800-01 | Rice | nucleus | 3.57 | 0.4 |
| TraesCS3A01G489700.1 | Wheat | nucleus | 3.57 | 0.4 |
| TraesCS3B01G550200.2 | Wheat | nucleus | 3.57 | 0.4 |
| TraesCS3D01G495700.1 | Wheat | nucleus | 3.57 | 0.4 |
| TraesCS7B01G321400.1 | Wheat | nucleus | 3.57 | 0.4 |
| Solyc10g079650.1.1 | Tomato | nucleus | 3.57 | 0.4 |
| TraesCS2B01G543800.1 | Wheat | nucleus | 3.57 | 0.4 |
| TraesCS2D01G517000.1 | Wheat | nucleus | 3.57 | 0.4 |
| HORVU2Hr1G114070.1 | Barley | nucleus | 3.57 | 0.4 |
| TraesCS7A01G421000.1 | Wheat | nucleus | 3.57 | 0.39 |
| CDX80905 | Canola | nucleus | 3.57 | 0.26 |
| Zm00001d042062_P001 | Maize | nucleus | 0.0 | 0.0 |
| Zm00001d011847_P001 | Maize | nucleus | 0.0 | 0.0 |
| HORVU3Hr1G108660.1 | Barley | nucleus | 0.0 | 0.0 |
| HORVU3Hr1G108670.2 | Barley | nucleus | 0.0 | 0.0 |
| TraesCS3D01G495400.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3D01G495300.1 | Wheat | nucleus | 0.0 | 0.0 |
| KRG95137 | Soybean | cytosol, nucleus, plastid | 0.0 | 0.0 |
| TraesCS3B01G549800.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3B01G549700.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3A01G489500.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3A01G489400.1 | Wheat | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400076775 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX76023 | EnsemblPlantsGene:GSBRNA2T00126247001 | ProteinID:CDX76023 | ProteinID:CDX76023.1 | UniParc:UPI0004EDEB27 | MapMan:35.2 |
Description
BnaA04g02870D
Coordinates
chrLK031806:-:257209..257295
Molecular Weight (calculated)
3579.2 Da
IEP (calculated)
4.102
GRAVY (calculated)
-1.132
Length
28 amino acids
Sequence
(BLAST)
(BLAST)
1: MDDHYKMNCE ELSERMLYLY EECENSFR
001: MCALVPSFFT NFGWPSTNQY ESYYGAGDNL NNGTFLELTV PQTYEVTHHQ NSLGVSVSSE GNEIDNNPVV VKKLNHNASE RDRRKKINTL FSSLRSCLPA
101: SDQSKKLSIP ETVSKSLKYI PELQQQVKRL IQKKEEILVR VSGQRDFELY DKQQPKAVAS YLSTVSATRL GDNEVMVQVS SSKIHNFSIS NVLGGIEEDG
201: FVLVDVSSSR SQGERLFYTL HLQVENMDDY KINCEELSER MLYLYEKCEN SFN
101: SDQSKKLSIP ETVSKSLKYI PELQQQVKRL IQKKEEILVR VSGQRDFELY DKQQPKAVAS YLSTVSATRL GDNEVMVQVS SSKIHNFSIS NVLGGIEEDG
201: FVLVDVSSSR SQGERLFYTL HLQVENMDDY KINCEELSER MLYLYEKCEN SFN
Arabidopsis Description
ORG2Transcription factor ORG2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1K1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.