Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G04150.1 | Thale cress | nucleus | 41.13 | 61.54 |
| PGSC0003DMT400076759 | Potato | nucleus | 17.74 | 38.33 |
| VIT_08s0007g05300.t01 | Wine grape | nucleus | 23.91 | 37.96 |
| Solyc10g079680.1.1 | Tomato | nucleus | 18.51 | 37.31 |
| VIT_13s0047g00450.t01 | Wine grape | nucleus | 21.08 | 36.44 |
| CDY47392 | Canola | nucleus | 23.14 | 35.16 |
| CDX76025 | Canola | nucleus | 23.14 | 35.16 |
| KRG95137 | Soybean | cytosol, nucleus, plastid | 10.54 | 35.04 |
| CDY47394 | Canola | nucleus | 22.88 | 34.9 |
| CDX76026 | Canola | nucleus | 22.11 | 34.68 |
| CDY69684 | Canola | nucleus | 22.36 | 34.66 |
| CDY68089 | Canola | nucleus | 22.36 | 34.66 |
| VIT_13s0073g00400.t01 | Wine grape | extracellular, golgi, nucleus | 21.34 | 34.44 |
| CDY47395 | Canola | nucleus | 19.54 | 34.39 |
| PGSC0003DMT400076775 | Potato | cytosol | 9.25 | 34.29 |
| CDX85121 | Canola | nucleus | 21.08 | 33.33 |
| Solyc10g079650.1.1 | Tomato | nucleus | 21.08 | 32.8 |
| CDX76031 | Canola | nucleus | 21.08 | 32.67 |
| CDX67670 | Canola | nucleus | 20.82 | 32.53 |
| CDY06938 | Canola | nucleus | 19.79 | 32.35 |
| CDX77489 | Canola | cytosol, nucleus, plastid | 20.31 | 32.11 |
| CDY14758 | Canola | nucleus | 19.54 | 31.93 |
| CDY71118 | Canola | nucleus | 20.31 | 31.85 |
| CDY06149 | Canola | nucleus | 20.31 | 31.73 |
| CDX97997 | Canola | nucleus | 19.79 | 31.69 |
| CDY72354 | Canola | nucleus | 19.79 | 31.69 |
| CDY71388 | Canola | cytosol | 20.31 | 31.47 |
| CDX77490 | Canola | nucleus | 20.05 | 31.45 |
| CDY23861 | Canola | cytosol, plastid | 11.31 | 31.43 |
| CDY06148 | Canola | nucleus | 20.05 | 31.33 |
| KRH66814 | Soybean | nucleus | 19.28 | 31.12 |
| Zm00001d042062_P001 | Maize | nucleus | 17.74 | 31.08 |
| KRH66812 | Soybean | cytosol, nucleus, plastid | 19.02 | 30.71 |
| CDX72085 | Canola | nucleus | 19.79 | 30.68 |
| Zm00001d011847_P001 | Maize | nucleus | 17.99 | 30.57 |
| CDX67671 | Canola | nucleus | 19.02 | 29.72 |
| GSMUA_Achr8P22120_001 | Banana | nucleus | 18.25 | 29.58 |
| CDY06147 | Canola | nucleus | 19.02 | 29.48 |
| Os01t0952800-01 | Rice | nucleus | 18.51 | 29.15 |
| CDY47396 | Canola | mitochondrion | 21.59 | 28.47 |
| CDX72086 | Canola | nucleus | 17.22 | 28.39 |
| TraesCS3B01G549700.1 | Wheat | nucleus | 15.17 | 28.23 |
| CDX76032 | Canola | cytosol | 15.68 | 27.23 |
| KXG34133 | Sorghum | nucleus | 16.97 | 27.05 |
| CDX76027 | Canola | nucleus | 15.94 | 26.96 |
| TraesCS3D01G495700.1 | Wheat | nucleus | 16.97 | 26.72 |
| TraesCS3A01G489700.1 | Wheat | nucleus | 16.97 | 26.72 |
| TraesCS3A01G489600.1 | Wheat | nucleus | 16.71 | 26.53 |
| TraesCS3D01G495300.1 | Wheat | nucleus | 15.94 | 26.5 |
| HORVU2Hr1G114070.1 | Barley | nucleus | 17.22 | 26.48 |
| TraesCS2A01G515300.1 | Wheat | nucleus | 17.22 | 26.48 |
| TraesCS3B01G550200.2 | Wheat | nucleus | 16.71 | 26.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.71 | 26.32 |
| HORVU3Hr1G108670.2 | Barley | nucleus | 16.2 | 26.25 |
| TraesCS2B01G543700.1 | Wheat | nucleus | 16.45 | 26.23 |
| TraesCS3D01G495600.1 | Wheat | nucleus | 16.45 | 26.12 |
| TraesCS3B01G549800.1 | Wheat | nucleus | 15.94 | 26.05 |
| TraesCS3D01G495400.1 | Wheat | nucleus | 15.94 | 26.05 |
| HORVU3Hr1G108680.1 | Barley | nucleus | 16.45 | 26.02 |
| TraesCS3B01G550000.1 | Wheat | nucleus | 16.2 | 25.71 |
| TraesCS2D01G517000.1 | Wheat | nucleus | 16.71 | 25.69 |
| TraesCS3A01G489500.1 | Wheat | nucleus | 15.68 | 25.63 |
| TraesCS2B01G543800.1 | Wheat | nucleus | 16.45 | 25.6 |
| HORVU3Hr1G108660.1 | Barley | nucleus | 14.91 | 25.0 |
| TraesCS3A01G489400.1 | Wheat | nucleus | 14.65 | 24.57 |
| TraesCS7B01G321400.1 | Wheat | nucleus | 14.65 | 22.89 |
| TraesCS7A01G421000.1 | Wheat | nucleus | 14.91 | 22.83 |
| Solyc10g079660.1.1 | Tomato | nucleus | 21.34 | 11.91 |
| CDX76023 | Canola | cytosol | 0.26 | 3.57 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.6 | MapMan:25.5.1.3 | Gene3D:3.40.50.670 | Gene3D:4.10.280.10 | GO:A0A078CVL5 |
| EnsemblPlants:CDX80905 | ProteinID:CDX80905 | ProteinID:CDX80905.1 | ncoils:Coil | InterPro:DNA_gyrase_B_C | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0003918 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006265 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00134310001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR013759 | InterPro:IPR036638 |
| InterPro:MASH1/Ascl1a-like | PFAM:PF00010 | PFAM:PF00986 | PRINTS:PR00418 | PFscan:PS50888 | PANTHER:PTHR13935 |
| PANTHER:PTHR13935:SF41 | SMART:SM00353 | SUPFAM:SSF47459 | SUPFAM:SSF56719 | InterPro:Topo_IIA-like_dom_sf | InterPro:Topo_IIA_B_C |
| UniParc:UPI0004EED42F | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaC03g01590D
Coordinates
chrLK031823:-:722629..725244
Molecular Weight (calculated)
44959.2 Da
IEP (calculated)
9.946
GRAVY (calculated)
-0.490
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MCALTPMFPS NQQEWYSTST MEYPWLDSFS PTLPSSLYPS FDQLDEFKSY NINLLPHHMN LADINGTNND QEEHQGSVLE KKLNHNASER DRRRKLNALY
101: ASLRALLPPS DQKRKLSIPK TIAGVVKYIP EQKQELQRLS RRKEELMKRI SNKTETLNHQ QEQLRNRALM MESIDSSSQK IAANWITDTE IAVQIATWKW
201: TSISDILLRL EENGLNAISV SSSVSSTARI FYTLHLQMRG GCRVRLEELD VKEIPWNGRH KTRAITRIIV RSTASLTTPY NISSKLATCF NTKNLRFSKT
301: KRDVGCLWKY LKGYIDGAHI RTLLLTFFFK YQRALFDAGC IYVGVPPLFK TLKRLQQTSL QELPTAFKGL GEMMPEQLWE TMMNPETRI
101: ASLRALLPPS DQKRKLSIPK TIAGVVKYIP EQKQELQRLS RRKEELMKRI SNKTETLNHQ QEQLRNRALM MESIDSSSQK IAANWITDTE IAVQIATWKW
201: TSISDILLRL EENGLNAISV SSSVSSTARI FYTLHLQMRG GCRVRLEELD VKEIPWNGRH KTRAITRIIV RSTASLTTPY NISSKLATCF NTKNLRFSKT
301: KRDVGCLWKY LKGYIDGAHI RTLLLTFFFK YQRALFDAGC IYVGVPPLFK TLKRLQQTSL QELPTAFKGL GEMMPEQLWE TMMNPETRI
001: MCTLTPMFPS KQQEWYSAST MEYPWLQSQV HSFSPTLHFP SFLHPLDDSK SHNINLHHMS LSHSNNTNSN NNNYQEEDRG AVVLEKKLNH NASERDRRRK
101: LNALYSSLRA LLPLSDQKRK LSIPMTVARV VKYIPEQKQE LQRLSRRKEE LLKRISRKTH QEQLRNKAMM DSIDSSSSQR IAANWLTDTE IAVQIATSKW
201: TSVSDMLLRL EENGLNVISV SSSVSSTARI FYTLHLQMRG DCKVRLEELI NGMLLGLRQS
101: LNALYSSLRA LLPLSDQKRK LSIPMTVARV VKYIPEQKQE LQRLSRRKEE LLKRISRKTH QEQLRNKAMM DSIDSSSSQR IAANWLTDTE IAVQIATSKW
201: TSVSDMLLRL EENGLNVISV SSSVSSTARI FYTLHLQMRG DCKVRLEELI NGMLLGLRQS
Arabidopsis Description
BHLH101basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT5G04150]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.