Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80905 | Canola | nucleus | 61.54 | 41.13 |
| VIT_13s0047g00450.t01 | Wine grape | nucleus | 34.62 | 40.0 |
| VIT_08s0007g05300.t01 | Wine grape | nucleus | 36.92 | 39.18 |
| PGSC0003DMT400076759 | Potato | nucleus | 26.54 | 38.33 |
| PGSC0003DMT400076775 | Potato | cytosol | 15.38 | 38.1 |
| VIT_13s0073g00400.t01 | Wine grape | extracellular, golgi, nucleus | 34.62 | 37.34 |
| KRG95137 | Soybean | cytosol, nucleus, plastid | 16.15 | 35.9 |
| Solyc10g079680.1.1 | Tomato | nucleus | 26.15 | 35.23 |
| AT3G56970.1 | Thale cress | nucleus | 33.85 | 34.78 |
| AT3G56980.1 | Thale cress | nucleus | 34.23 | 34.5 |
| Solyc10g079650.1.1 | Tomato | nucleus | 31.92 | 33.2 |
| Zm00001d042062_P001 | Maize | nucleus | 28.08 | 32.88 |
| KRH66814 | Soybean | nucleus | 29.62 | 31.95 |
| AT2G41240.1 | Thale cress | nucleus | 29.62 | 31.82 |
| KRH66812 | Soybean | cytosol, nucleus, plastid | 29.23 | 31.54 |
| GSMUA_Achr8P22120_001 | Banana | nucleus | 28.85 | 31.25 |
| TraesCS3B01G549700.1 | Wheat | nucleus | 25.0 | 31.1 |
| Zm00001d011847_P001 | Maize | nucleus | 27.31 | 31.0 |
| HORVU3Hr1G108680.1 | Barley | nucleus | 27.69 | 29.27 |
| TraesCS3D01G495700.1 | Wheat | nucleus | 27.69 | 29.15 |
| TraesCS3D01G495400.1 | Wheat | nucleus | 26.54 | 28.99 |
| TraesCS3A01G489700.1 | Wheat | nucleus | 27.31 | 28.74 |
| TraesCS3B01G550200.2 | Wheat | nucleus | 27.31 | 28.74 |
| KXG34133 | Sorghum | nucleus | 26.92 | 28.69 |
| Os01t0952800-01 | Rice | nucleus | 26.92 | 28.34 |
| TraesCS3D01G495300.1 | Wheat | nucleus | 25.38 | 28.21 |
| TraesCS3B01G549800.1 | Wheat | nucleus | 25.77 | 28.15 |
| TraesCS2A01G515300.1 | Wheat | nucleus | 27.31 | 28.06 |
| HORVU3Hr1G108660.1 | Barley | nucleus | 25.0 | 28.02 |
| HORVU3Hr1G108670.2 | Barley | nucleus | 25.77 | 27.92 |
| TraesCS3A01G489500.1 | Wheat | nucleus | 25.38 | 27.73 |
| TraesCS3A01G489400.1 | Wheat | nucleus | 24.62 | 27.59 |
| HORVU2Hr1G114070.1 | Barley | nucleus | 26.54 | 27.27 |
| TraesCS3A01G489600.1 | Wheat | nucleus | 25.38 | 26.94 |
| TraesCS2D01G517000.1 | Wheat | nucleus | 26.15 | 26.88 |
| TraesCS3D01G495600.1 | Wheat | nucleus | 24.62 | 26.12 |
| TraesCS2B01G543800.1 | Wheat | nucleus | 25.0 | 26.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.62 | 25.91 |
| TraesCS2B01G543700.1 | Wheat | nucleus | 24.23 | 25.82 |
| TraesCS3B01G550000.1 | Wheat | nucleus | 24.23 | 25.71 |
| TraesCS7B01G321400.1 | Wheat | nucleus | 23.85 | 24.9 |
| TraesCS7A01G421000.1 | Wheat | nucleus | 23.46 | 24.02 |
| Solyc10g079660.1.1 | Tomato | nucleus | 31.15 | 11.62 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.6 | MapMan:25.5.1.3 | Gene3D:4.10.280.10 | EntrezGene:830293 | UniProt:A0A2H1ZE47 |
| ProteinID:AED90705.2 | ArrayExpress:AT5G04150 | EnsemblPlantsGene:AT5G04150 | RefSeq:AT5G04150 | TAIR:AT5G04150 | RefSeq:AT5G04150-TAIR-G |
| EnsemblPlants:AT5G04150.1 | TAIR:AT5G04150.1 | Symbol:BHLH101 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006357 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010106 | GO:GO:0019725 | GO:GO:0046983 |
| GO:GO:0055072 | GO:GO:0090575 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MASH1/Ascl1a-like |
| RefSeq:NP_196035.2 | PFAM:PF00010 | PO:PO:0007115 | PO:PO:0009005 | PO:PO:0009025 | PFscan:PS50888 |
| PANTHER:PTHR13935 | PANTHER:PTHR13935:SF41 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002262CD1 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BHLH101basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT5G04150]
Coordinates
chr5:-:1138410..1139633
Molecular Weight (calculated)
30036.9 Da
IEP (calculated)
10.158
GRAVY (calculated)
-0.629
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTLTPMFPS KQQEWYSAST MEYPWLQSQV HSFSPTLHFP SFLHPLDDSK SHNINLHHMS LSHSNNTNSN NNNYQEEDRG AVVLEKKLNH NASERDRRRK
101: LNALYSSLRA LLPLSDQKRK LSIPMTVARV VKYIPEQKQE LQRLSRRKEE LLKRISRKTH QEQLRNKAMM DSIDSSSSQR IAANWLTDTE IAVQIATSKW
201: TSVSDMLLRL EENGLNVISV SSSVSSTARI FYTLHLQMRG DCKVRLEELI NGMLLGLRQS
101: LNALYSSLRA LLPLSDQKRK LSIPMTVARV VKYIPEQKQE LQRLSRRKEE LLKRISRKTH QEQLRNKAMM DSIDSSSSQR IAANWLTDTE IAVQIATSKW
201: TSVSDMLLRL EENGLNVISV SSSVSSTARI FYTLHLQMRG DCKVRLEELI NGMLLGLRQS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.