Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47394 | Canola | nucleus | 83.0 | 82.35 |
| Bra014659.1-P | Field mustard | nucleus | 83.0 | 82.03 |
| CDX76025 | Canola | nucleus | 83.0 | 82.03 |
| CDY47392 | Canola | nucleus | 83.0 | 82.03 |
| AT3G56980.1 | Thale cress | nucleus | 79.05 | 77.52 |
| AT2G41240.1 | Thale cress | nucleus | 52.17 | 54.55 |
| VIT_13s0047g00450.t01 | Wine grape | nucleus | 40.71 | 45.78 |
| VIT_08s0007g05300.t01 | Wine grape | nucleus | 43.87 | 45.31 |
| KRG95137 | Soybean | cytosol, nucleus, plastid | 20.55 | 44.44 |
| VIT_13s0073g00400.t01 | Wine grape | extracellular, golgi, nucleus | 40.71 | 42.74 |
| KRH66812 | Soybean | cytosol, nucleus, plastid | 38.74 | 40.66 |
| KRH66814 | Soybean | nucleus | 38.34 | 40.25 |
| PGSC0003DMT400076759 | Potato | nucleus | 25.3 | 35.56 |
| Solyc10g079650.1.1 | Tomato | nucleus | 33.99 | 34.4 |
| Solyc10g079680.1.1 | Tomato | nucleus | 26.09 | 34.2 |
| AT5G04150.1 | Thale cress | nucleus | 34.78 | 33.85 |
| GSMUA_Achr8P22120_001 | Banana | nucleus | 32.02 | 33.75 |
| PGSC0003DMT400076775 | Potato | cytosol | 13.83 | 33.33 |
| Zm00001d042062_P001 | Maize | nucleus | 28.85 | 32.88 |
| Zm00001d011847_P001 | Maize | nucleus | 29.64 | 32.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.83 | 31.58 |
| TraesCS3B01G549700.1 | Wheat | nucleus | 26.09 | 31.58 |
| KXG34133 | Sorghum | nucleus | 30.04 | 31.15 |
| TraesCS2B01G543700.1 | Wheat | nucleus | 30.04 | 31.15 |
| TraesCS3B01G550200.2 | Wheat | nucleus | 30.04 | 30.77 |
| TraesCS3D01G495600.1 | Wheat | nucleus | 29.64 | 30.61 |
| HORVU2Hr1G114070.1 | Barley | nucleus | 30.43 | 30.43 |
| TraesCS2B01G543800.1 | Wheat | nucleus | 30.04 | 30.4 |
| TraesCS3A01G489700.1 | Wheat | nucleus | 29.64 | 30.36 |
| TraesCS3A01G489600.1 | Wheat | nucleus | 29.25 | 30.2 |
| TraesCS2A01G515300.1 | Wheat | nucleus | 30.04 | 30.04 |
| Os01t0952800-01 | Rice | nucleus | 29.25 | 29.96 |
| TraesCS3D01G495700.1 | Wheat | nucleus | 29.25 | 29.96 |
| TraesCS3B01G550000.1 | Wheat | nucleus | 28.85 | 29.8 |
| HORVU3Hr1G108680.1 | Barley | nucleus | 28.85 | 29.67 |
| TraesCS2D01G517000.1 | Wheat | nucleus | 29.64 | 29.64 |
| TraesCS3D01G495400.1 | Wheat | nucleus | 27.67 | 29.41 |
| HORVU3Hr1G108670.2 | Barley | nucleus | 27.67 | 29.17 |
| TraesCS3B01G549800.1 | Wheat | nucleus | 27.27 | 28.99 |
| TraesCS3A01G489500.1 | Wheat | nucleus | 27.27 | 28.99 |
| TraesCS7B01G321400.1 | Wheat | nucleus | 28.06 | 28.51 |
| HORVU3Hr1G108660.1 | Barley | nucleus | 26.09 | 28.45 |
| TraesCS3A01G489400.1 | Wheat | nucleus | 25.69 | 28.02 |
| TraesCS7A01G421000.1 | Wheat | nucleus | 28.06 | 27.95 |
| TraesCS3D01G495300.1 | Wheat | nucleus | 25.3 | 27.35 |
| Solyc10g079660.1.1 | Tomato | nucleus | 35.57 | 12.91 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.6 | MapMan:25.5.1.3 | Gene3D:4.10.280.10 | EntrezGene:824864 | ProteinID:AEE79594.1 |
| EMBL:AF488576 | EMBL:AK221542 | ArrayExpress:AT3G56970 | EnsemblPlantsGene:AT3G56970 | RefSeq:AT3G56970 | TAIR:AT3G56970 |
| RefSeq:AT3G56970-TAIR-G | EnsemblPlants:AT3G56970.1 | TAIR:AT3G56970.1 | Symbol:BHLH038 | EMBL:BT026419 | ProteinID:CAB72167.1 |
| ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 |
| GO:GO:0010106 | GO:GO:0019725 | GO:GO:0046983 | GO:GO:0055072 | GO:GO:0090575 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MASH1/Ascl1a-like | RefSeq:NP_191256.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR13935 | PANTHER:PTHR13935:SF41 | UniProt:Q9M1K1 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00000AAD52 |
| InterPro:bHLH_dom | : | : | : | : | : |
Description
ORG2Transcription factor ORG2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1K1]
Coordinates
chr3:-:21084035..21085245
Molecular Weight (calculated)
28715.8 Da
IEP (calculated)
5.701
GRAVY (calculated)
-0.514
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MCALVPSFFT NFGWPSTNQY ESYYGAGDNL NNGTFLELTV PQTYEVTHHQ NSLGVSVSSE GNEIDNNPVV VKKLNHNASE RDRRKKINTL FSSLRSCLPA
101: SDQSKKLSIP ETVSKSLKYI PELQQQVKRL IQKKEEILVR VSGQRDFELY DKQQPKAVAS YLSTVSATRL GDNEVMVQVS SSKIHNFSIS NVLGGIEEDG
201: FVLVDVSSSR SQGERLFYTL HLQVENMDDY KINCEELSER MLYLYEKCEN SFN
101: SDQSKKLSIP ETVSKSLKYI PELQQQVKRL IQKKEEILVR VSGQRDFELY DKQQPKAVAS YLSTVSATRL GDNEVMVQVS SSKIHNFSIS NVLGGIEEDG
201: FVLVDVSSSR SQGERLFYTL HLQVENMDDY KINCEELSER MLYLYEKCEN SFN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.