Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72354 | Canola | nucleus | 100.0 | 100.0 |
| Bra004609.1-P | Field mustard | nucleus | 97.94 | 97.94 |
| CDY23861 | Canola | cytosol, plastid | 53.5 | 92.86 |
| CDY06938 | Canola | nucleus | 79.01 | 80.67 |
| CDY14758 | Canola | nucleus | 78.19 | 79.83 |
| AT2G41240.1 | Thale cress | nucleus | 67.49 | 67.77 |
| CDX76026 | Canola | nucleus | 55.97 | 54.84 |
| CDY47394 | Canola | nucleus | 56.38 | 53.73 |
| CDY47392 | Canola | nucleus | 56.38 | 53.52 |
| CDX76025 | Canola | nucleus | 56.38 | 53.52 |
| CDY68089 | Canola | nucleus | 55.14 | 53.39 |
| CDX76031 | Canola | nucleus | 54.73 | 52.99 |
| CDY69684 | Canola | nucleus | 54.73 | 52.99 |
| CDY47395 | Canola | nucleus | 47.33 | 52.04 |
| CDY06148 | Canola | nucleus | 51.44 | 50.2 |
| CDX85121 | Canola | nucleus | 50.21 | 49.59 |
| CDX77489 | Canola | cytosol, nucleus, plastid | 49.79 | 49.19 |
| CDY71388 | Canola | cytosol | 50.21 | 48.61 |
| CDX72086 | Canola | nucleus | 46.91 | 48.31 |
| CDX77490 | Canola | nucleus | 48.97 | 47.98 |
| CDY06149 | Canola | nucleus | 48.97 | 47.79 |
| CDX67670 | Canola | nucleus | 48.97 | 47.79 |
| CDY71118 | Canola | nucleus | 48.56 | 47.58 |
| CDX72085 | Canola | nucleus | 48.56 | 47.01 |
| CDX76027 | Canola | nucleus | 44.44 | 46.96 |
| CDX67671 | Canola | nucleus | 47.74 | 46.59 |
| CDX76023 | Canola | cytosol | 5.35 | 46.43 |
| CDY06147 | Canola | nucleus | 47.74 | 46.22 |
| CDY47396 | Canola | mitochondrion | 52.26 | 43.05 |
| CDX76032 | Canola | cytosol | 39.09 | 42.41 |
| VIT_13s0047g00450.t01 | Wine grape | nucleus | 35.39 | 38.22 |
| KRH66814 | Soybean | nucleus | 37.45 | 37.76 |
| KRG95137 | Soybean | cytosol, nucleus, plastid | 18.11 | 37.61 |
| KRH66812 | Soybean | cytosol, nucleus, plastid | 37.04 | 37.34 |
| VIT_08s0007g05300.t01 | Wine grape | nucleus | 37.04 | 36.73 |
| PGSC0003DMT400076759 | Potato | nucleus | 26.34 | 35.56 |
| VIT_13s0073g00400.t01 | Wine grape | extracellular, golgi, nucleus | 34.57 | 34.85 |
| Solyc10g079680.1.1 | Tomato | nucleus | 26.75 | 33.68 |
| PGSC0003DMT400076775 | Potato | cytosol | 13.99 | 32.38 |
| Solyc10g079650.1.1 | Tomato | nucleus | 32.51 | 31.6 |
| TraesCS2B01G543800.1 | Wheat | nucleus | 32.1 | 31.2 |
| HORVU2Hr1G114070.1 | Barley | nucleus | 31.69 | 30.43 |
| TraesCS2D01G517000.1 | Wheat | nucleus | 31.28 | 30.04 |
| TraesCS2B01G543700.1 | Wheat | nucleus | 30.04 | 29.92 |
| Zm00001d042062_P001 | Maize | nucleus | 27.16 | 29.73 |
| Zm00001d011847_P001 | Maize | nucleus | 27.57 | 29.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.63 | 29.15 |
| TraesCS2A01G515300.1 | Wheat | nucleus | 30.04 | 28.85 |
| GSMUA_Achr8P22120_001 | Banana | nucleus | 28.4 | 28.75 |
| Os01t0952800-01 | Rice | nucleus | 29.22 | 28.74 |
| TraesCS7B01G321400.1 | Wheat | nucleus | 29.22 | 28.51 |
| TraesCS3B01G549800.1 | Wheat | nucleus | 27.57 | 28.15 |
| TraesCS7A01G421000.1 | Wheat | nucleus | 29.22 | 27.95 |
| TraesCS3B01G549700.1 | Wheat | nucleus | 23.87 | 27.75 |
| TraesCS3D01G495400.1 | Wheat | nucleus | 27.16 | 27.73 |
| HORVU3Hr1G108680.1 | Barley | nucleus | 27.98 | 27.64 |
| HORVU3Hr1G108660.1 | Barley | nucleus | 26.34 | 27.59 |
| TraesCS3A01G489500.1 | Wheat | nucleus | 26.75 | 27.31 |
| TraesCS3A01G489700.1 | Wheat | nucleus | 27.57 | 27.13 |
| TraesCS3B01G550200.2 | Wheat | nucleus | 27.57 | 27.13 |
| TraesCS3D01G495700.1 | Wheat | nucleus | 27.57 | 27.13 |
| KXG34133 | Sorghum | nucleus | 27.16 | 27.05 |
| TraesCS3D01G495600.1 | Wheat | nucleus | 27.16 | 26.94 |
| HORVU3Hr1G108670.2 | Barley | nucleus | 26.34 | 26.67 |
| TraesCS3B01G550000.1 | Wheat | nucleus | 26.75 | 26.53 |
| TraesCS3A01G489600.1 | Wheat | nucleus | 26.75 | 26.53 |
| TraesCS3A01G489400.1 | Wheat | nucleus | 25.1 | 26.29 |
| TraesCS3D01G495300.1 | Wheat | nucleus | 25.1 | 26.07 |
| CDX80905 | Canola | nucleus | 31.69 | 19.79 |
| Solyc10g079660.1.1 | Tomato | nucleus | 34.57 | 12.05 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.6 | MapMan:25.5.1.3 | Gene3D:4.10.280.10 | GO:A0A078EAH3 | UniProt:A0A078EAH3 |
| EnsemblPlants:CDX97997 | ProteinID:CDX97997 | ProteinID:CDX97997.1 | ProteinID:CDY72354.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00105356001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MASH1/Ascl1a-like | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR13935 | PANTHER:PTHR13935:SF41 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE592F | InterPro:bHLH_dom |
Description
BnaA06g07480DBnaA05g34220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EAH3]
Coordinates
chrLK031902:+:476148..477207
Molecular Weight (calculated)
27347.3 Da
IEP (calculated)
5.955
GRAVY (calculated)
-0.476
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MCALVPPLFP HFDWPCGDQS FFVNDDLTNT FLDFSLPDLE VAHQNASSER HGVLEVKNQV VMKKLNHNAS ERDRRKKINT MFSSLRSCLP ASDQSKKLSV
101: SATVSHALNY IPELQEQVKQ LIKKKDDLSF QISGQKDLVY ADQNGNPEKG GTRYASTVSS TRLGETEVMV QISSLQTVKC SFGNLLSGTE EDGLVLMDAS
201: SSRSQGERLF YTLHFQMDNC NLNFEELNDR LLYLYEKCGK STT
101: SATVSHALNY IPELQEQVKQ LIKKKDDLSF QISGQKDLVY ADQNGNPEKG GTRYASTVSS TRLGETEVMV QISSLQTVKC SFGNLLSGTE EDGLVLMDAS
201: SSRSQGERLF YTLHFQMDNC NLNFEELNDR LLYLYEKCGK STT
001: MCALVPPLYP NFGWPCGDHS FYETDDVSNT FLDFPLPDLT VTHENVSSEN NRTLLDNPVV MKKLNHNASE RERRKKINTM FSSLRSCLPP TNQTKKLSVS
101: ATVSQALKYI PELQEQVKKL MKKKEELSFQ ISGQRDLVYT DQNSKSEEGV TSYASTVSST RLSETEVMVQ ISSLQTEKCS FGNVLSGVEE DGLVLVGASS
201: SRSHGERLFY SMHLQIKNGQ VNSEELGDRL LYLYEKCGHS FT
101: ATVSQALKYI PELQEQVKKL MKKKEELSFQ ISGQRDLVYT DQNSKSEEGV TSYASTVSST RLSETEVMVQ ISSLQTEKCS FGNVLSGVEE DGLVLVGASS
201: SRSHGERLFY SMHLQIKNGQ VNSEELGDRL LYLYEKCGHS FT
Arabidopsis Description
BHLH100BHLH100 [Source:UniProtKB/TrEMBL;Acc:A0A178VX33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.