Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027546_P001 | Maize | nucleus | 80.43 | 81.52 |
| Os03t0135700-01 | Rice | nucleus | 75.34 | 79.38 |
| TraesCS4D01G328700.1 | Wheat | cytosol | 28.69 | 73.29 |
| TraesCS4B01G331900.1 | Wheat | nucleus | 57.37 | 70.16 |
| TraesCS4B01G332000.1 | Wheat | nucleus | 64.88 | 69.74 |
| TraesCS4D01G328900.1 | Wheat | nucleus | 64.61 | 69.25 |
| TraesCSU01G069400.1 | Wheat | nucleus | 65.15 | 69.03 |
| TraesCS4D01G329100.1 | Wheat | nucleus | 64.61 | 68.86 |
| TraesCS4D01G328800.1 | Wheat | nucleus | 64.34 | 67.99 |
| TraesCS4D01G329000.2 | Wheat | nucleus | 63.81 | 67.42 |
| TraesCS5A01G503300.1 | Wheat | nucleus | 63.81 | 67.42 |
| TraesCS5A01G503500.1 | Wheat | nucleus | 63.0 | 66.76 |
| HORVU4Hr1G080890.1 | Barley | nucleus | 62.73 | 65.92 |
| KRH73107 | Soybean | mitochondrion, nucleus | 28.15 | 64.42 |
| TraesCS3A01G057900.1 | Wheat | nucleus | 56.03 | 63.91 |
| TraesCSU01G069300.1 | Wheat | nucleus | 59.79 | 63.35 |
| TraesCS5A01G503400.1 | Wheat | nucleus | 60.05 | 62.05 |
| TraesCS3A01G058000.1 | Wheat | nucleus | 49.87 | 62.0 |
| GSMUA_Achr7P03930_001 | Banana | nucleus | 39.14 | 61.6 |
| TraesCS3B01G070400.1 | Wheat | nucleus | 50.13 | 61.31 |
| TraesCS3D01G058100.1 | Wheat | nucleus | 47.99 | 60.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.8 | 59.49 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 41.29 | 53.85 |
| KRG99605 | Soybean | cytosol | 21.72 | 51.27 |
| KRH39520 | Soybean | nucleus | 42.63 | 47.75 |
| KRH74438 | Soybean | nucleus | 42.63 | 47.6 |
| KRH62159 | Soybean | nucleus | 41.82 | 47.27 |
| VIT_18s0001g08040.t01 | Wine grape | nucleus | 41.82 | 46.71 |
| KRH52870 | Soybean | nucleus | 41.02 | 46.22 |
| KRH16909 | Soybean | nucleus | 41.55 | 46.13 |
| KRH16156 | Soybean | nucleus | 33.51 | 45.96 |
| KRH72519 | Soybean | nucleus | 40.48 | 45.35 |
| KRH45479 | Soybean | nucleus | 38.87 | 45.31 |
| VIT_00s1312g00010.t01 | Wine grape | nucleus | 39.68 | 44.71 |
| Solyc02g091690.2.1 | Tomato | nucleus | 38.34 | 43.47 |
| Solyc02g063430.2.1 | Tomato | nucleus | 37.27 | 43.3 |
| PGSC0003DMT400026937 | Potato | nucleus | 37.8 | 43.25 |
| PGSC0003DMT400016360 | Potato | nucleus | 39.14 | 43.2 |
| PGSC0003DMT400078675 | Potato | nucleus | 38.34 | 42.69 |
| Solyc12g088130.1.1 | Tomato | nucleus | 37.8 | 41.96 |
| VIT_17s0000g03550.t01 | Wine grape | nucleus | 36.19 | 41.93 |
| AT5G10570.1 | Thale cress | nucleus | 35.39 | 41.9 |
| CDX97027 | Canola | nucleus | 32.17 | 40.27 |
| Bra009022.1-P | Field mustard | nucleus | 32.44 | 39.93 |
| EER88977 | Sorghum | plastid | 40.48 | 39.53 |
| CDX69821 | Canola | nucleus | 31.9 | 39.27 |
| AT5G65640.1 | Thale cress | nucleus | 36.46 | 38.75 |
| CDY08769 | Canola | nucleus | 37.0 | 38.44 |
| Bra024404.1-P | Field mustard | nucleus | 37.0 | 38.44 |
| CDY69978 | Canola | nucleus | 35.92 | 37.43 |
| CDY37835 | Canola | nucleus | 35.66 | 37.15 |
| Bra031852.1-P | Field mustard | nucleus | 35.66 | 37.15 |
| PGSC0003DMT400005209 | Potato | nucleus | 24.93 | 36.05 |
| KXG27392 | Sorghum | cytosol | 13.14 | 30.62 |
| EES04142 | Sorghum | nucleus | 23.86 | 23.67 |
| EES05013 | Sorghum | nucleus | 13.4 | 17.73 |
| EES14602 | Sorghum | nucleus | 13.67 | 17.71 |
| EES08566 | Sorghum | nucleus | 24.4 | 17.5 |
| KXG26070 | Sorghum | nucleus | 14.75 | 15.03 |
| KXG29315 | Sorghum | nucleus | 18.5 | 12.08 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:8057408 | UniProt:C5WZ04 | ncoils:Coil | EnsemblPlants:EER92904 |
| ProteinID:EER92904 | ProteinID:EER92904.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR31945 |
| PANTHER:PTHR31945:SF4 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3001G513700 | SUPFAM:SSF47459 | UniParc:UPI0001A82C8C | RefSeq:XP_002465906.1 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:78105995..78108059
Molecular Weight (calculated)
39900.2 Da
IEP (calculated)
4.824
GRAVY (calculated)
-0.362
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MELDEEAFLD ELMSLRREAA ASSAPWQQAD PCSAYPGAGG GGGGMMMSDL LFYGGTTEGA AADATSMDLS PFHQEPLQAP MPPAAARTPL PPPHPHEEFN
101: FDCLSEVCNP YRSGGGGVAV PGAEAVAVPG HKQALAALHD AMVEEETSGD LDLQGQQHYG GGGSPTFVFG GGARGESSEM PIVRGVGGPH HHRSKLHGAP
201: SKNLMAERRR RKRLNDRLSM LRSIVPKISK MDRTSILGDT IDYVKELTER IKVLEEEIGA SPEDLDLLNT LKDSSSCSNE MMVRNSTKFD VEKRGNGSTR
301: IEICCPTNPG VLLSTVSALE VLGLEIEQCV VSCFSDFAMQ ASCSQEDGKR QVLSTDEIKQ ALFRSAGYGG RCL
101: FDCLSEVCNP YRSGGGGVAV PGAEAVAVPG HKQALAALHD AMVEEETSGD LDLQGQQHYG GGGSPTFVFG GGARGESSEM PIVRGVGGPH HHRSKLHGAP
201: SKNLMAERRR RKRLNDRLSM LRSIVPKISK MDRTSILGDT IDYVKELTER IKVLEEEIGA SPEDLDLLNT LKDSSSCSNE MMVRNSTKFD VEKRGNGSTR
301: IEICCPTNPG VLLSTVSALE VLGLEIEQCV VSCFSDFAMQ ASCSQEDGKR QVLSTDEIKQ ALFRSAGYGG RCL
001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
Arabidopsis Description
BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.