Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08769 | Canola | nucleus | 99.72 | 99.72 |
| AT5G65640.1 | Thale cress | nucleus | 87.74 | 89.74 |
| Bra031852.1-P | Field mustard | nucleus | 89.14 | 89.39 |
| KRH73107 | Soybean | mitochondrion, nucleus | 32.87 | 72.39 |
| Bra009022.1-P | Field mustard | nucleus | 56.55 | 67.0 |
| KRG99605 | Soybean | cytosol | 27.02 | 61.39 |
| GSMUA_Achr1P26300_001 | Banana | nucleus | 40.39 | 60.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.55 | 59.92 |
| GSMUA_Achr7P03930_001 | Banana | nucleus | 38.72 | 58.65 |
| VIT_00s1312g00010.t01 | Wine grape | nucleus | 50.14 | 54.38 |
| KRH74438 | Soybean | nucleus | 49.86 | 53.59 |
| KRH39520 | Soybean | nucleus | 49.03 | 52.85 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 41.78 | 52.45 |
| KRH45479 | Soybean | nucleus | 46.52 | 52.19 |
| VIT_18s0001g08040.t01 | Wine grape | nucleus | 47.35 | 50.9 |
| KRH62159 | Soybean | nucleus | 46.52 | 50.61 |
| Solyc02g063430.2.1 | Tomato | nucleus | 44.85 | 50.16 |
| KRH52870 | Soybean | nucleus | 46.24 | 50.15 |
| KRH16909 | Soybean | nucleus | 46.52 | 49.7 |
| PGSC0003DMT400026937 | Potato | nucleus | 45.13 | 49.69 |
| VIT_17s0000g03550.t01 | Wine grape | nucleus | 44.29 | 49.38 |
| KRH16156 | Soybean | nucleus | 36.77 | 48.53 |
| KRH72519 | Soybean | nucleus | 44.85 | 48.35 |
| TraesCS4D01G328700.1 | Wheat | cytosol | 19.5 | 47.95 |
| PGSC0003DMT400078675 | Potato | nucleus | 43.18 | 46.27 |
| Solyc02g091690.2.1 | Tomato | nucleus | 42.34 | 46.2 |
| TraesCS4B01G331900.1 | Wheat | nucleus | 33.7 | 39.67 |
| Os03t0135700-01 | Rice | nucleus | 38.44 | 38.98 |
| TraesCS3A01G057900.1 | Wheat | nucleus | 33.98 | 37.31 |
| Zm00001d027546_P001 | Maize | nucleus | 38.16 | 37.23 |
| EER92904 | Sorghum | nucleus | 38.44 | 37.0 |
| TraesCS3D01G058100.1 | Wheat | nucleus | 30.36 | 36.82 |
| TraesCS4D01G329100.1 | Wheat | nucleus | 34.54 | 35.43 |
| TraesCS4D01G328900.1 | Wheat | nucleus | 34.26 | 35.34 |
| TraesCS3A01G058000.1 | Wheat | nucleus | 29.53 | 35.33 |
| TraesCS5A01G503300.1 | Wheat | nucleus | 34.54 | 35.13 |
| TraesCS4D01G329000.2 | Wheat | nucleus | 34.54 | 35.13 |
| TraesCS3B01G070400.1 | Wheat | nucleus | 29.8 | 35.08 |
| TraesCSU01G069400.1 | Wheat | nucleus | 34.26 | 34.94 |
| TraesCS5A01G503500.1 | Wheat | nucleus | 34.26 | 34.94 |
| HORVU4Hr1G080890.1 | Barley | nucleus | 34.54 | 34.93 |
| TraesCS4B01G332000.1 | Wheat | nucleus | 33.7 | 34.87 |
| TraesCS4D01G328800.1 | Wheat | nucleus | 33.98 | 34.56 |
| TraesCS5A01G503400.1 | Wheat | nucleus | 32.31 | 32.13 |
| TraesCSU01G069300.1 | Wheat | nucleus | 30.64 | 31.25 |
| Bra011152.1-P | Field mustard | nucleus | 17.27 | 25.0 |
| Bra034246.1-P | Field mustard | nucleus | 28.69 | 24.64 |
| Bra024115.1-P | Field mustard | nucleus | 16.71 | 24.59 |
| Bra019794.1-P | Field mustard | nucleus | 28.13 | 23.76 |
| Bra020462.1-P | Field mustard | nucleus | 15.88 | 23.17 |
| Bra002756.1-P | Field mustard | nucleus | 15.88 | 23.17 |
| Bra032947.1-P | Field mustard | nucleus | 28.41 | 23.08 |
| Bra016749.1-P | Field mustard | nucleus | 27.02 | 22.4 |
| Bra006831.1-P | Field mustard | nucleus | 15.32 | 22.36 |
| Bra025226.1-P | Field mustard | nucleus | 28.97 | 20.93 |
| Bra011972.1-P | Field mustard | nucleus | 15.32 | 17.41 |
| Bra034392.1-P | Field mustard | nucleus | 15.32 | 17.41 |
| Bra000495.1-P | Field mustard | nucleus | 14.76 | 17.21 |
| Bra031723.1-P | Field mustard | cytosol | 16.43 | 15.29 |
| Bra002004.1-P | Field mustard | nucleus | 23.12 | 14.64 |
| Bra013041.1-P | Field mustard | nucleus | 22.84 | 14.44 |
| Bra019914.1-P | Field mustard | cytosol | 15.04 | 12.95 |
Protein Annotations
| EnsemblPlants:Bra024404.1 | EnsemblPlants:Bra024404.1-P | EnsemblPlantsGene:Bra024404 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR31945 | PANTHER:PTHR31945:SF6 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000253F574 | UniProt:M4E6K0 | MapMan:15.5.32 | : |
Description
AT5G65640 (E=7e-149) bHLH093 | bHLH093 (beta HLH protein 93); DNA binding / transcription factor
Coordinates
chrA06:+:15557740..15559594
Molecular Weight (calculated)
40398.5 Da
IEP (calculated)
4.671
GRAVY (calculated)
-0.572
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSTQMNVF EELLVQTKQE TTDDINTNYN NLSFNGGFDH HHHPHQQLFP NGWNIDYLCF NNEEEDENTL LYSSSFMDLI SQPPPLLLHQ TPLLPPPSAS
101: SPPLTSSVAT TFDYPFLEAL QEIIDSSSPS PPLMLPTSQE DSFINPTSYP SPLMESDQSK SFSVGYCGGE TTNKKKSKKL EGQPSKNLMA ERRRRKRLND
201: RLSMLRSIVP KISKMDRTSI LGDAIDYMKE LLDKINKLQE EEQELGNSNG SHHSKLFGDI KDLNTNEPMV RNSPKFEVDR RVVDTRVDIC CSPKPGLLLS
301: TVNTLETLGL EIEQCVISCF SDFSLQASCS EAAQQRDFIT SEDIKQALFR NAGYGGNCL
101: SPPLTSSVAT TFDYPFLEAL QEIIDSSSPS PPLMLPTSQE DSFINPTSYP SPLMESDQSK SFSVGYCGGE TTNKKKSKKL EGQPSKNLMA ERRRRKRLND
201: RLSMLRSIVP KISKMDRTSI LGDAIDYMKE LLDKINKLQE EEQELGNSNG SHHSKLFGDI KDLNTNEPMV RNSPKFEVDR RVVDTRVDIC CSPKPGLLLS
301: TVNTLETLGL EIEQCVISCF SDFSLQASCS EAAQQRDFIT SEDIKQALFR NAGYGGNCL
001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L
Arabidopsis Description
BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.