Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P08070_001 | Banana | nucleus | 32.7 | 78.9 |
| GSMUA_Achr10P... | Banana | nucleus | 70.53 | 71.9 |
| GSMUA_Achr6P08060_001 | Banana | nucleus | 41.25 | 57.26 |
| GSMUA_Achr10P... | Banana | nucleus | 55.32 | 57.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.55 | 56.5 |
| KRH63854 | Soybean | nucleus | 46.39 | 52.47 |
| KRH54112 | Soybean | nucleus | 45.25 | 51.52 |
| PGSC0003DMT400074075 | Potato | nucleus | 48.48 | 48.11 |
| Solyc06g068870.2.1 | Tomato | nucleus | 47.91 | 47.46 |
| GSMUA_Achr1P26300_001 | Banana | nucleus | 19.01 | 41.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.63 | 41.35 |
| GSMUA_Achr7P03930_001 | Banana | nucleus | 18.06 | 40.08 |
| GSMUA_Achr8P34120_001 | Banana | nucleus | 19.39 | 35.66 |
| GSMUA_Achr10P... | Banana | nucleus | 8.37 | 32.12 |
| GSMUA_Achr6P30900_001 | Banana | nucleus | 9.89 | 24.76 |
| GSMUA_Achr3P00640_001 | Banana | nucleus | 12.74 | 22.48 |
| GSMUA_Achr7P16000_001 | Banana | nucleus | 10.84 | 21.92 |
| GSMUA_Achr1P07450_001 | Banana | nucleus, plastid | 12.17 | 21.84 |
| GSMUA_Achr6P27600_001 | Banana | nucleus | 11.03 | 19.08 |
| GSMUA_Achr4P12700_001 | Banana | nucleus | 9.89 | 17.63 |
| GSMUA_Achr1P07330_001 | Banana | nucleus | 13.88 | 17.3 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.4.3.4.1 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr11G09640_001 | EnsemblPlants:GSMUA_Achr11P09640_001 | EnsemblPlants:GSMUA_Achr11T09640_001 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M0RQU4 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR31945 |
| PANTHER:PTHR31945:SF13 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002962751 | InterPro:bHLH_dom | SEG:seg |
Description
Putative Transcription factor ICE1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09640_001]
Coordinates
chr11:+:7516596..7519187
Molecular Weight (calculated)
56037.1 Da
IEP (calculated)
4.976
GRAVY (calculated)
-0.370
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSRINSALW TEDGGDEGDA ALWSRANASS SKGGGMGASK EDELGLTSFK SLLEDDWYAA LAASCPGQCA AATHPFEAFL AQQDLKDVAF LSNPSPHEAL
101: LPPSVGNLDQ SQPFFPSKAA LSSLLNAANP LDAGHGLGSD IPGFLPAAQA SNFPVVMNRK GDGPAAAMLG VVGIGTYGQL GRPELHSGSQ LFGGRLPPPA
201: ENCSSSSSDA AMFPLSFDNF ENSPFLNRAK ELRPLEMFPT VGAPPTLFQK RTAAALQQNS AGENERKRKG NEEDDVDDDG IYGSGLNYDS GDASGENAKG
301: EENAKTEADG GGGNNSNADL MVTGGGMDKG KKKCFPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAVEYL KELLQRINDL QNELESTPSS
401: SSLPTTTTTS LHTMIPTFSA LPCHMKDELC PSSLQSPNSQ SARVEVRAKE GRAVNIHMFC ARRPGLLLSA MRALDGLGLD IQQAVISCFN GFALDIFQAE
501: QCKEPGVLPE DIKTVLLHSL GFQSTM
101: LPPSVGNLDQ SQPFFPSKAA LSSLLNAANP LDAGHGLGSD IPGFLPAAQA SNFPVVMNRK GDGPAAAMLG VVGIGTYGQL GRPELHSGSQ LFGGRLPPPA
201: ENCSSSSSDA AMFPLSFDNF ENSPFLNRAK ELRPLEMFPT VGAPPTLFQK RTAAALQQNS AGENERKRKG NEEDDVDDDG IYGSGLNYDS GDASGENAKG
301: EENAKTEADG GGGNNSNADL MVTGGGMDKG KKKCFPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAVEYL KELLQRINDL QNELESTPSS
401: SSLPTTTTTS LHTMIPTFSA LPCHMKDELC PSSLQSPNSQ SARVEVRAKE GRAVNIHMFC ARRPGLLLSA MRALDGLGLD IQQAVISCFN GFALDIFQAE
501: QCKEPGVLPE DIKTVLLHSL GFQSTM
001: MGLDGNNGGG VWLNGGGGER EENEEGSWGR NQEDGSSQFK PMLEGDWFSS NQPHPQDLQM LQNQPDFRYF GGFPFNPNDN LLLQHSIDSS SSCSPSQAFS
101: LDPSQQNQFL STNNNKGCLL NVPSSANPFD NAFEFGSESG FLNQIHAPIS MGFGSLTQLG NRDLSSVPDF LSARSLLAPE SNNNNTMLCG GFTAPLELEG
201: FGSPANGGFV GNRAKVLKPL EVLASSGAQP TLFQKRAAMR QSSGSKMGNS ESSGMRRFSD DGDMDETGIE VSGLNYESDE INESGKAAES VQIGGGGKGK
301: KKGMPAKNLM AERRRRKKLN DRLYMLRSVV PKISKMDRAS ILGDAIDYLK ELLQRINDLH NELESTPPGS LPPTSSSFHP LTPTPQTLSC RVKEELCPSS
401: LPSPKGQQAR VEVRLREGRA VNIHMFCGRR PGLLLATMKA LDNLGLDVQQ AVISCFNGFA LDVFRAEQCQ EGQEILPDQI KAVLFDTAGY AGMI
101: LDPSQQNQFL STNNNKGCLL NVPSSANPFD NAFEFGSESG FLNQIHAPIS MGFGSLTQLG NRDLSSVPDF LSARSLLAPE SNNNNTMLCG GFTAPLELEG
201: FGSPANGGFV GNRAKVLKPL EVLASSGAQP TLFQKRAAMR QSSGSKMGNS ESSGMRRFSD DGDMDETGIE VSGLNYESDE INESGKAAES VQIGGGGKGK
301: KKGMPAKNLM AERRRRKKLN DRLYMLRSVV PKISKMDRAS ILGDAIDYLK ELLQRINDLH NELESTPPGS LPPTSSSFHP LTPTPQTLSC RVKEELCPSS
401: LPSPKGQQAR VEVRLREGRA VNIHMFCGRR PGLLLATMKA LDNLGLDVQQ AVISCFNGFA LDVFRAEQCQ EGQEILPDQI KAVLFDTAGY AGMI
Arabidopsis Description
SCRMTranscription factor ICE1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSE2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.